Gambusia affinis (western mosquitofish): 122846697
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Entry
122846697 CDS
T07758
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122846697 (stxbp5b)
Membrane trafficking [BR:
gaf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122846697 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122846697 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_IFT140_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Lgl_C
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
122846697
NCBI-ProteinID:
XP_043999728
LinkDB
All DBs
Position
LG16:6425571..6462529
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AA seq
1191 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSSATAQPGTPRENDVVQETLQSEHFQLCKTVRHGFPYQPS
SMAYDPVQKILAVGTQTGALRLFGRAGVECYCQHESGAAVIQLQFLINEGALVSALADDS
IHLWNLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVI
MWNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKSKKADYRYNYDEAIH
SVAWHHEGKQFVCSHSDGTLTTWNIRAPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYK
TTRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFITLCETPYPNDFQE
PYAVVVLLEKDLVVIDLGQIGYPIFESPYPLSIHESPVTCCEYFADCPSELIPALYSVGS
RQKRQGYSKKEWPISGGNWGQGTQTYPEIIITGHADGSIKFWDASALMLQVLYKLKTAKV
FERARGKEEKPSTDIVDEDPFAIQTLFWCPESRMLCVAGVSAHVIIYRFSKQEATTEVVQ
LLEVRMQCEFSEVDSPDPGGEQTPTLPTSAASSSPQEAEPPNQLTAGVNSSEGSRDNIPC
LQVRSSPLKQSPGYQVELVVQLVWVSGEPPQQITSLAVNSSFGLVVFGNSNGLAVVDYVQ
KTLLLNLGTWELYSPSDPCQRQLRSPRKPRQPSGGFCDSNDGSNNSEDRCKSPTSGSTSP
CNSDDERKQNFIEKVKLKSRRFSKTVANDFAKMSRKISSSGEQKPDLEDRSRRGSPWLCK
WPAGSMKNGKLAARMTQKLNVHRTKSDPHRYGKDNAFTRSRSSSVTSIDRESREAISSFY
FCESFPRKSGSLASPCLLVGTTQGSVTVVALSLQPGGDQKLQQPLSFASCGTLVQLKGGI
LTMALLDAAGTLLPPSCEAWYDPNASDEEKEKEKTRRRRPATPPSSQEGQDSQFAVLCSD
KQAKVVAMPSQTSIYKHNITETSFVLRADVVQMTGAYCIACFCANGHIMTLSLPSLRPLL
DFNYLPLTDMRIARTFCFSNLGQALYMTSPTEIQRITYSQETCDNLQEMLSELFTPVETP
EAPNRGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPGSMEGMKGAASGVVGD
LARARVALDERGQKLGELEERTAAMMASAESFSKHAHNMMVKYKDKKWYQL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacataaggaaggtgctggacggcttgacagcggcgtcttcttcttcc
tcctccgcaactgctcagcctggtactcccagggaaaacgatgttgtccaggagactctc
cagtcggaacattttcagctgtgcaagaccgtgcgtcatggctttccatatcaaccgtcc
tcgatggcttatgaccccgtgcagaaaatcctggccgtcgggactcagaccggagctttg
aggctgttcggccgtgcgggtgtggagtgctactgtcagcatgagagcggggctgctgtc
atccagctccagttcctcatcaatgagggggcgctggtgagtgccttagctgatgacagc
atccatctgtggaacctgaggcaaaaaattccagctatcctgcattctctcaagtttaac
cgggagagaatcacatactgccacctgcccttccagagcaaatggctgtacatcggcaca
gagcgaggaaacatccacatcgtcaacgtggagtccttcaccctctcaggctatgtcatc
atgtggaacaaagccatcgaattatccaccaagacacacccagggcctgttgtgcacatt
agtgataaccccatggacgagggcaagcttctgattggatttgagtgtggggtcgtggtg
ttgtgggatttgaagtccaagaaagctgactaccgctacaattatgatgaggcgatccac
tcagttgcttggcaccacgaggggaaacagtttgtctgcagccactccgatggcactctg
accacgtggaatatacgcgccccagccaagcctgcacagatcatcacgccacatggaaag
cagcctaaggatggaaaaaagccagagccgtgcaagcctatcctaaaagtggagtacaaa
actacaagagctggggacccgttcatggttctgtccggagggctgtcgtacgacacagtg
gggaggagagcctgtttgaccgtgatgcacgggaagagcactgccgtcctggagatggac
tatcccattgtagatttcataacgctctgcgaaactccatatccaaacgactttcaggag
ccttacgctgtggtggtcctcctcgagaaggatttagttgtaatagatcttggacaaatt
gggtatccgatatttgagagcccctaccctctctccatccacgagtcaccggtgacgtgt
tgcgagtattttgccgactgcccctctgaactcattcctgcactttactccgtcggcagc
cggcaaaagcgacaaggctacagcaagaaggaatggcccattagtggtggaaactggggc
caaggcacgcagacttacccagagattatcatcacagggcatgccgatgggtcaatcaaa
ttttgggatgcttctgcgttaatgcttcaagtgctgtacaagctgaagactgccaaggtg
ttcgagagggcccggggtaaggaggagaagccgagcaccgacatcgtcgacgaagacccg
tttgccatccagaccttgttctggtgtccggagagcaggatgctgtgcgtggctggagtt
tctgctcacgtcatcatctacaggttcagcaaacaggaagccaccactgaagttgttcag
ctgctggaggttcggatgcagtgcgagttcagcgaggtcgactcccccgatccgggggga
gagcagacccccaccctgccgacctccgcagcttcctccagccctcaggaggccgagccc
ccgaaccagctcactgcaggcgtcaactcctccgaaggatccagagacaatataccatgc
cttcaggtgcggagctccccgctgaagcagtctccgggctaccaggtggagctggtggtc
cagctggtgtgggtgagcggggagccgcctcagcagatcaccagcctggcagtcaactcc
tccttcggcctcgtggtgttcgggaacagcaacggtctggcagtggtggactacgtccag
aagaccctgctgctcaacctgggcacctgggagctgtacagcccgtcggacccctgccag
aggcaactccgctccccgcggaaaccacgccagccttctggaggattttgcgactccaac
gacgggtctaacaactcagaggaccgatgcaaatctcccacgtcaggatctacctcaccc
tgcaattcagacgacgaacgaaaacagaacttcatagagaaggtgaagttaaaaagcaga
cgcttttccaagacggttgccaatgactttgccaagatgtcgcggaaaattagctcgtct
ggtgagcaaaagccagatctggaggaccgctcccgccgggggtccccttggttgtgtaaa
tggcccgctggtagtatgaaaaatggcaagctggcggccaggatgacccagaagttgaat
gttcatagaactaagtcagacccgcaccgatatgggaaggataacgcattcacccgctcg
cgtagctcaagcgtgaccagcatagacagagaatcccgagaggccatctcctccttttac
ttctgcgagagtttccccaggaagtcaggcagcctggccagcccctgcctgctggtgggg
accacgcagggctccgtgacggtggtggccctcagcctgcagccgggcggcgaccagaag
ctgcagcagccgctcagctttgcctcctgcggaaccttggtccaactcaaaggaggcatc
ctgaccatggccctgctggatgctgctggaactctgctgcccccttcctgcgaagcgtgg
tacgaccccaacgcctcagacgaggagaaagagaaagagaagacccggaggcgcaggccg
gccacgcctccatcctcacaggaaggccaggactcccagtttgccgtgctgtgttcggac
aagcaggccaaggtggtggccatgccgtcccaaaccagcatctacaaacacaacatcacc
gagacctcgtttgtgctgcgcgccgacgtggtgcagatgaccggggcttactgcatcgcc
tgtttctgtgccaacggccacattatgaccctgagcttgcccagtctgcggcctctgctg
gacttcaactacttgccgctgacagatatgcggatagccagaacgttttgcttctctaac
ttgggccaggctctgtacatgacctcacccaccgagatccagaggatcacctacagccag
gagacgtgcgacaaccttcaggaaatgctcagcgagttatttacccccgtggagacgccg
gaggctccgaacagaggcttcttcaaaggcctttttggcggaggagctcagtctttggac
agggaagacctcttcggcgaaacggcggccggcaaggcctcgcgtagcctggcccagcac
atcccgggcccgggcagcatggagggcatgaagggcgcggcgtctggggtggtgggcgac
ctcgcccgggcccgggtggcgctggacgagagagggcagaaactgggagagctggaggag
aggacggcagccatgatggccagcgcggagtccttctcgaaacacgcccacaacatgatg
gtgaagtacaaagataaaaagtggtaccagctctga
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integrated database retrieval system
