Gambusia affinis (western mosquitofish): 122846820
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Entry
122846820 CDS
T07758
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122846820 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122846820 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122846820 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122846820 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122846820 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122846820 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122846820 (thbs4b)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Opsonins
122846820 (thbs4b)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122846820 (thbs4b)
Exosomal proteins of colorectal cancer cells
122846820 (thbs4b)
Exosomal proteins of bladder cancer cells
122846820 (thbs4b)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122846820 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
122846820
NCBI-ProteinID:
XP_043999946
LinkDB
All DBs
Position
LG17:complement(8989662..9008112)
Genome browser
AA seq
941 aa
AA seq
DB search
MILWTFIILLSQLLLNLCLHAEAQALAVYNLLTSPDCLPDLLQGGLAEQGVNEAFILTTF
KLQPKTGTTLFGLFNPRDNSKYFEFTVMRKLNRAVLRYLRTDKRMSSVSFNNLVLADGQQ
HRLLFHLKGLQQQGPGAVELHLDCRLVETVRDLPAAFQGLPAGYGMVELKTMQARDQESL
DELKLVVGDSFENVASLQDCHFQQRDSVQTLGVNTKQLSNQMLELTKVINELKDVLIQQV
KETSFLRNTISECQACGLGGTEVVKPRCAPGVCFRDDMCIETANGVECAPCPDGYTGDGF
NCDDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYVGLPVEGVGILFAQTNKQVCDDIDE
CKGPDNGGCTANSICHNSVGSFYCGSCKTGFTGDQVRGCEPELSCGNSLTNPCDINAECI
RERDGTISCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDANCRKDNCIFVPNSGQEDAD
RDGQGDACDDDADGDGIPNEQDNCRLKPNVDQRNSDADSHGDACDNCRMVNNPDQRDTDG
DGKGDACDDDMDGDGVRNFLDNCQRVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDVDND
LVGDSCDTNQDSDGDGHQDTKDNCPLVINSSQLDTDKDGVGDECDDDDDNDGIPDTLPPG
PDNCRLVPNPEQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLD
PEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFI
FGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSRSGPGEHLRNSLWHTGDT
NDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGTQLVADSGVTIDTTMRGG
RLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSAQHTVDSI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtggacattcatcattctgctctcgcagctgttattaaacctgtgcttacat
gcagaggcccaggctttggcagtctacaatctgctcacctcgcctgactgcttgccagac
ctgctgcagggaggtttggctgaacaaggggtgaacgaggctttcatcttaaccaccttc
aagctgcagcccaagactggaaccacactgtttggcttgttcaacccaagggacaacagc
aagtattttgagttcaccgtaatgaggaagctcaatcgggctgtgttacgttacttgcgg
actgacaagagaatgagctctgttagcttcaacaaccttgtgctggcggacggccagcag
caccggctgttgttccacctgaagggtctgcagcagcaggggccaggcgcagtggagcta
catctggactgcaggctggttgagacagtccgggatcttcctgctgccttccagggtttg
ccagcggggtacggcatggtggagctaaagacaatgcaagccagggatcaggagagctta
gacgagctgaaactggtggttggggactcatttgagaatgttgcatcattgcaagactgt
cattttcagcaaagagattcggttcaaactttaggggtcaacacaaagcagctgtcaaat
caaatgctggagttaacaaaggtgataaacgagcttaaagacgttctcatccagcaggtt
aaggaaacatcttttctccgaaacactatttcagagtgtcaggcttgtggtctgggtgga
acagaggtggtgaaaccgagatgtgctcctggtgtctgtttccgtgatgatatgtgtatt
gagacagcaaatggtgtggagtgtgctccctgtcctgatgggtacactggagatggcttc
aactgtgatgatgttgatgagtgccagtttaacccctgctttcctggagtgaagtgcgtt
aacaccgcccctggcttccgctgcgacgcctgcccgctgggttacgtcggcctgccagtg
gagggcgtgggcattttgttcgctcaaaccaacaaacaggtctgcgatgacattgatgaa
tgcaaaggacccgacaacggtggctgtactgcaaactcaatctgtcacaactctgtgggc
tccttttactgtggcagctgtaagactggattcacaggagatcaggtgaggggctgtgag
ccagagctcagctgtggaaacagcctgaccaacccctgcgacatcaacgccgagtgcatt
cgagaaagagatggcactatttcttgtcagtgtggaattggctgggcgggcaacggatac
ctgtgcgggaaagacactgacattgatggatacccggatgaaaagctcaagtgcaaggac
gcaaactgtagaaaggataattgcatctttgttcctaactctggtcaagaggacgctgac
agggatggccagggagacgcctgtgatgacgatgcagatggtgacggtattcccaatgag
caggacaactgccggttgaagcccaacgtggatcagaggaacagtgatgcagacagccac
ggcgatgcctgtgacaactgtcgcatggtgaacaaccccgaccagcgggacactgacggg
gatggcaaaggcgatgcctgcgacgatgacatggacggagacggggtgagaaattttctg
gacaactgccagcgtgtccagaacagagaccagctggaccgggatggagacggcgtggga
gatgcttgcgacagctgccctgacatccccaatccaaaccagtctgacgttgataatgac
ctggttggagactcgtgcgacacaaaccaagacagcgatggcgatggtcaccaggatacc
aaggacaattgtccactagtgattaacagctcacagctggacactgacaaagacggggtg
ggagacgaatgtgacgacgatgatgacaatgatgggatcccagatactctaccgccagga
ccagacaactgcaggctggtgcccaaccccgaacagatcgatgacaacaatgacggcgtt
ggagatatctgcgagtccgactttgaccaggacaaagtgattgaccggattgacaattgc
cctgagaacgcagaggtcaccctgacagacttcagggcctaccagacagtggtgctggac
cctgagggagatgcacagatcgaccccaactgggttgtcctcaaccagggaatggaaata
gttcagaccatgaacagtgacccgggacttgctgttggatacactgctttcagtggtgtc
gactttgaggggacttttcacgtgaacacggttaccgacgacgactatgccggcttcatc
tttggctaccaggactcgtcgtccttctatgtggtgatgtggaagcagactgagcagacc
tactggcaggcgacccctttcagagctgtggccgagccaggcatccagcttaaggctgta
aagtccaggtcgggccctggggaacacttgagaaactccctgtggcacacaggagacacc
aacgaccaggtgcgtctgctgtggaaggacccgaggaacgttggctggaaggataaagtt
tcctaccgctggtatttgcagcaccgtccacaggtcggatatatcagagtgaggttttac
gagggaactcagctggttgcagattctggtgtgactatcgacacaaccatgagaggaggg
cgactcggcgtgttctgcttctcacaagaaaacatcatctggtccaatctgaaatatcgc
tgcaacgacaccatcccagaggatttccaggagttcagcgctcaacacactgttgactca
atctaa
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