Gambusia affinis (western mosquitofish): 122846841
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Entry
122846841 CDS
T07758
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gaf01100
Metabolic pathways
Module
gaf_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122846841 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gaf01003
]
122846841 (csgalnact1a)
Enzymes [BR:
gaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
122846841 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
122846841 (csgalnact1a)
Glycosyltransferases [BR:
gaf01003
]
Glycan extension
O-Glycan
122846841 (csgalnact1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
Motif
Other DBs
NCBI-GeneID:
122846841
NCBI-ProteinID:
XP_043999987
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Position
LG17:complement(9370248..9408919)
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AA seq
586 aa
AA seq
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MLRRGLLTWVSRVGGLLVLLCCSLSLLYLMTCSPPHSNNPPLSHVLPHAGSNHPSLGGTG
PVVGAGPSGTRGGGDASQSRGPPAAHSYQLLLQEREEQHRLYISSLKKQIAQLKEDLQER
SLQLKRVQESLKTAANGPAEGQNGGAELQGAGFGEVQGAKSQQSDLQEFLRTQLSKAEIS
SGSRLPNEYAVVPFESFTLQKMYQLEMGLTRHPEEKPVRKDKRDELGEVLEAALHSLNTP
SSHQDNKVPAEKTQTSKVYTPSDFIEGISRTERDKGTLYELTFRGEASHEFRRLVLFRPF
GPLMKVRNERMDTTNIMINIIVPLSRRADKFKQFMHNFREVCVRQDGRVHLTVVYFGKEQ
MSEVRSTLENTSREASFKNYTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTA
DFLNTCRLNTQPGKKVFYPVLFSQYNPALIYGSPEHIPPVEQQLVIKKDTGFWRDFGFGM
TCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKHCADEL
PPDQYRMCMQSKAMNEASHGQLGMLFFRHEIEAHLHKQKLQNPKKT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggcgcggactgctaacttgggtgtcccgtgtggggggcctgctggtgctcctc
tgctgctccctctcacttctctatctgatgacctgcagccctccacattccaacaaccct
ccgcttagtcacgttttaccccacgcagggtccaaccaccccagccttggaggtacaggc
cccgtggtcggagcagggcccagtgggacaagaggaggaggagatgcttctcaaagccgg
ggtccaccagcagcccactcttaccagttgctcctccaggagcgcgaggagcagcaccgc
ctctacatctcctccttaaagaaacagatcgctcagctgaaggaggacctgcaggagcgc
agtctgcagctgaaaagagtgcaggagagcctgaaaacggctgcaaacggacccgcagag
gggcagaacgggggcgccgaattacagggggctggctttggagaggttcagggggcaaag
agccagcagtctgacctgcaagagttccttcgaactcagctgtcaaaagccgagataagc
tctggtagcaggttgcccaacgagtacgccgtggtgccttttgagagcttcaccctgcag
aagatgtaccaactggaaatggggctcacgcgtcacccagaggaaaaaccagtgaggaag
gacaagagagatgaactgggagaggtgctggaggcggctctgcacagcctcaacacaccc
tcatcacatcaggataacaaggtgccagcagaaaagacccaaactagcaaagtctacaca
ccatctgactttatagaaggtatcagtcgtacagagagggacaaagggacgctgtatgag
ctgactttcagaggggaggcgagtcacgaattcagacgtctggtcctcttccgacccttc
ggacctctgatgaaggtcagaaatgaaaggatggacacaaccaatatcatgattaacatc
atcgtcccgctctcaagacgagccgataagttcaaacagttcatgcacaacttcagggaa
gtctgtgtgcgtcaggatggcagagtacatctgaccgtggtgtattttgggaaagagcag
atgagtgaagtccggagcaccctggagaacacatctagggaggccagcttcaagaactac
acactgcttcagctggacgaggagttttctcggggtcggggcctagacgtaggggcccga
gcctggaagggaggcaatgtgctgcttttcttctgtgatgtggacatctacttcaccgcc
gacttcctcaacacctgcagactcaacacacagccaggtaaaaaggtgttctaccccgtg
ttattcagccagtacaaccctgccctcatttatggaagtccagagcacatcccacctgtg
gagcaacagctggtgatcaagaaagacacaggcttttggagggattttggttttggtatg
acctgccaatacaggtctgactttatcaacataggaggttttgacattgacatcaaaggc
tggggcggcgaagacgtccacctctacagaaagtacctccacagcaacctcctggtcgtc
cgagcgccgtcacgcggcctcttccacctgtggcacgagaagcattgcgccgacgagctg
ccgccagaccagtaccgaatgtgcatgcagtccaaggccatgaacgaggcctcgcatggc
cagctgggaatgctcttcttcaggcatgagatcgaagctcatctccacaagcagaaactg
cagaacccaaagaagacgtga
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