Gambusia affinis (western mosquitofish): 122846926
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Entry
122846926 CDS
T07758
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122846926 (cacna1bb)
04020 Calcium signaling pathway
122846926 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122846926 (cacna1bb)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122846926 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
122846926
NCBI-ProteinID:
XP_044000123
LinkDB
All DBs
Position
LG17:complement(21153128..21290599)
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AA seq
2473 aa
AA seq
DB search
MASPIISAWTGRAGSRLSAFRGGEKLKSFSAFRSENPHKTAETPRWAAEMRRSVPHMSRW
AERRSTLVYAVRAATFGSWRMLTLGAEYEDTWVQTPKRVAGTPTVDPTPTGNPDTFTVEP
LEPSWRAVREESVWESDTTFTLDGLSGGAAGDGVRQVLWRHETLNNSPLTQRMARFADDL
PTRYGGSAGGGGRGAPGAGRGGARGGIGGGGQRMYKQSMAQRARTMAIYNPNPVKQNCLT
VNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPASDKTPMSERL
DDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSDFDLRT
LRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMGKFH
QSCFKPGAERVVDWPCGSELPARTCPNGTVCQEYWTGPNFGITNFDNILFAVLTVFQCIT
MEGWVDILYSTNDAVGNNWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEF
LKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKTPMDGAWYKRTQNLSVLKRGKI
KKGKNDLIGAEEGDDPFADMSSVVPPGSPFGRASVKSGGKMDSSSYFRRKEKRFRFFIRR
MVKAQSFYWIVLCLVGLNTLCVAIVHYDQPDWLTRALYTAELVFLGLFLTEMTLKMYGLG
VRNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISIAASYTVYCSPTRHILKYSKEQRS
AKTMSVWEQRTNQLRKHNTKTSTEALFNELDPDERLAASSALHLHPDMKTHTDRPLVLED
KNGDQPQAGAPEEAAAPGVRDSFHSRRRHHHRDRNGDGGDGPGVRRHSHHGHSREHNADA
AQDRERLRPQTGSPEEERGHRHHRSRRTPKEGNGRLTNGAQDDGKGGGDNSSSRIQRDKQ
AETEDDSLAGSPLQLKRSSLTPSEKQEDADNQKNSTRASQAALNSNAVHIPVTITAPPGE
TTIIPMNSIDCGNFQLSEEKKDLEEEEAANGPRQILPYSSMFVFGQTNPVRRLCHYVVNL
RYFEMCILIVITMSSITLAAEDPVEANADRNIALKYLDYVFTGVFTFEMVIKMIDLGLLL
HPGSYFRDLWNILDFIVVSGALVAFACSSLMGSQQSVARGTKGKDINTIKSLRVLRVLRP
LKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGL
EKDCRGQFLEYDREEVTAQPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPLVLKHSVDAT
YEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERA
CIDFAINARPLTRYMPENKQSFQYKMWKFVVSSPFEYAIMTLIALNTVVLMMKFYGAPMV
YESMLKYLNIVFTGLFTLECILKIIAFNPLNYLKEPWNVFDFVTVIGSITDILFTEINTN
KMINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
VFGNIELNEETSINHHNNFQTFFQALTLLFRSATGEAWHEIMLACLSNRPCDKLSGSSGK
DCGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYD
PAACGRICYRDMYKLLRLISPPLGLGKKCPNRVAYKRLVRMNMPIADDNTVHFTSTLMAL
IRTALEIKLASGVLAQRLCDADLKREIRRVWPNLQQKTIDLLVTPHKYNELTVGKVYAAH
MIFDYYKQNRAKKLQQQNPSGISQSKLGALFRPVLPFTHLHEPTPPIKPAPPPEPEPRTQ
APPTSTSSTATNVDANMDANVSVSPPSLNQRTSIKHSQSGDFSPAAARLKPHRRLQRGQS
EDVHRCSRAQERQADPKPENMSDAEGRPGLEGHARAASLPRLNAEYHRSHPRHAPGTHLA
PIVDLSPIKRSASSLTPQQVGLRDYDLERVDQSRFCAGPDPDRTHHHHHHHRCHRRRDKD
KDRKQKSLDKTSSAPPSGTVGSFEDPSADGLSRERARERDRSRPHERRHHSSAGEKQRYY
SCERYGNREPGQARSAGPSRSTSPGESQDSGLIKQQGSTVTKLPSGTSAQARGRRQLPQT
PLTPRPAVAYKTPTSSAAPPSASTPGSRFVRGASEHDRLLAAHEEPKAPAGPDSNPSRQQ
LDSSLLEEGEDFQDAVSSHGGGHSSRSATTPSTAAAQGRAAGVPNGYHFTLGSAPGSSRG
AAGLREREEEDWC
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccgataatcagcgcctggactgggagggcaggaagccggctttccgcattc
cgaggcggagaaaaactgaaaagtttctccgcttttcgttcagaaaacccgcataaaaca
gccgagactccccgctgggccgcagagatgcggaggtcggttccccacatgtccagatgg
gccgagcgccgatccacgctggtttacgcggtccgcgcagccacattcggttcgtggcgg
atgttgacactgggggcggaatacgaggacacctgggtccagactcccaaacgggtcgca
gggacccccactgtggacccgacccccactgggaacccggacactttcactgtggagcct
ctggagccgtcatggagagccgtccgtgaagaatccgtctgggaatccgacacaaccttt
accctggatgggctgagcggcggggcagcaggtgacggtgtccgccaggtgctgtggagg
catgaaaccctgaacaactcaccgctcacacaaagaatggctcgcttcgcagacgatcta
cccacccgctatggagggagcgcgggcggcggagggagaggcgcaccgggcgccgggaga
gggggcgcccggggcggcatcggaggcggcgggcagaggatgtacaagcagtccatggcc
cagagagcccgaaccatggccatttacaacccgaaccccgtcaaacagaactgcctcacg
gtcaaccgctccctgttcatcttccgtgaggacaacctcatcaggaagtatgcaaagaga
ataacagagtggcctccgtttgaatacatgatcctggcaacgattattgccaactgcatt
gtcttggcactggagcaacatctacccgctagcgacaagacgccgatgtcggaacgcctg
gacgacacagagccgtactttattggaatattctgtttcgaggcggccattaagatcatc
gccctgggcttcgcgtttcacaaaggctcgtacctccgcaacggctggaatgtaatggac
ttcgtggtcgtcctcacagggatcctcgccaccgtcggttcagactttgacctgcgaacg
ctgcgcgccgtcagagtgctgaggcccctcaaactggtgtccgggattcccagcctccag
gttgtgctgaagtccatcatgaaggccatggttccactgctgcagatcggcctgctgctg
ttcttcgccatcgtcatgttcgccatcatcggggtcgagttctacatgggcaagttccac
cagtcctgcttcaagcctggagcggagagagtggtggactggccgtgcgggtcggagttg
ccggccagaacctgtcccaacggcaccgtgtgccaggagtactggaccgggcccaacttc
ggcatcaccaactttgacaacatcctgttcgccgtgctgaccgtgttccagtgcatcacc
atggagggctgggtggacatcctgtacagcactaatgatgcagtgggaaacaactggaac
tggctctacttcatccctctcatcattattggctcctttttcatgctcaacttggtgctt
ggtgtcctgtcaggagaatttgccaaagagcgagaacgagtagagaaacgtcaggagttc
ctgaagcttcggcgacagcagcagatcgagcgggagctcaccgggtacctggagtggatc
tgcaaggcggaggaggtgttgcttgaagaagaagacgagatcgcagaggaaaagaccccg
atggacggcgcctggtacaagaggacacaaaacctttcagttctgaagcgaggaaaaatc
aagaagggtaaaaacgatctgattggtgcagaggagggcgacgatccctttgctgacatg
tcctctgttgttccccccggctccccgttcggtcgggccagtgtgaaaagcggcgggaag
atggacagctcatcttacttccggcgcaaggagaaacgcttccggttcttcatccggcgg
atggtgaaagctcagagtttctactggatcgttctgtgcctggtgggcctcaacacgctg
tgcgtggccatcgtccactacgaccagccggactggctgaccagagcgctctacacagca
gagctggtgtttctgggtttgttcctgacggagatgaccttgaagatgtacggcctcgga
gtgagaaattacttccactcgtccttcaactgctttgattttggggtgattgtgggaagt
atttttgaggtcatctgggacatgataaagccaggagcatcgtttgggatcagcgtgctg
agggccttgagactcctccggattttcaaagtcaccaaatactggaactcgttgaggaat
ctcgtcgtttcccttctcaactccatgaagtccatcatcagcctgctcttcctcctcttc
ctcttcattgtggtcttcgctttgctcggcatgcagctcttcggcggacagtttaacttt
gaagatgagaccccaacaacaaactttgataccttcccagcagccatcctcactgtgttc
cagatcctgaccggcgaggactggaacgccgtcatgtaccacggcatcgagtctcagggc
ggcgtccggcgtgggatgttctcctccatctacttcatcgtcctcacgctctttggaaac
tacactttgctaaacgtcttcttggccatcgctgttgataacctcgccaacgcccaagag
ctgacgaaggatgaagaggagcaggaggaagcagccaataagaagctggctctgcagaaa
gctctggaagtaaaagaagtcagcccgatgtcagccgccaacatttccatcgctgcgagt
tatacagtctactgctcccccactcgacatatcttgaaatacagcaaggagcagcgttct
gcaaagaccatgtcggtgtgggagcagcggaccaaccagctgaggaagcacaacacgaag
accagcaccgaggcgctgttcaacgagctggacccggacgagcgcctcgccgcctccagc
gccctccacctgcaccccgacatgaagacgcacaccgaccggccgctcgtcctggaggac
aagaacggcgaccagccccaagccggcgcgccggaggaggcggcggcgcccggcgtcagg
gacagcttccactccaggaggcgccaccaccaccgcgaccggaacggggacggaggcgac
ggcccgggggtccggcgccacagccaccatggccacagcagggagcacaacgccgacgct
gcccaggacagagagaggctccgcccccaaaccgggtcaccggaggaggagagaggccat
cgtcatcaccgctcccgccgcacgccgaaggaaggaaacggacgactgactaacggagcg
caagacgacgggaaagggggaggagacaacagctcctcacgcatccagagggacaaacag
gcggaaacggaggacgacagcctggctgggagtccgctgcagctgaagcgaagcagcctg
acgccgagtgaaaaacaggaagatgccgacaaccagaagaactcgaccagagccagccag
gccgccctgaacagcaacgccgtccacatccccgtcaccatcaccgcgccgcccggagaa
actaccatcatccccatgaacagcatcgattgtggcaacttccagctcagtgaggagaag
aaagatctggaagaggaggaggccgctaacgggccgcggcagattcttccctacagctcc
atgttcgtcttcggacaaacaaacccggtgcggcgcctgtgtcactacgtggtcaacctg
cgctactttgagatgtgcatcctgatcgtcatcaccatgagcagcatcacgctggccgcc
gaggacccggtggaggccaacgctgaccgcaacatcgctctgaaatacctggactatgtt
ttcactggagtcttcacgtttgagatggtgataaagatgatcgacctgggcctgctcctc
catcccggctcgtatttccgtgacctttggaacatcctggactttatcgtggtcagcggc
gctctggtggccttcgcctgctcgagcctcatgggatcacaacaaagtgtggccagagga
accaaggggaaagacatcaacaccatcaaatccctgcgggtgctgcgagttctgcgacct
ctgaagaccatcaagcggctgccgaagctgaaggctgtgttcgactgtgttgtgaactct
ctgaagaacgttctgaacatcctcatcgtctacatcctcttcatgttcatctttgccgtt
atcgccgttcagctcttcaaaggcaaattcttctactgtaccgacgagtccaaaggtctg
gagaaagactgcagaggtcagtttctggagtacgatcgtgaggaagtgacggctcagccc
agagagtggaagaagtatgagtttcactatgataatgttctctgggctttcctgacgctg
tttaccgtctccaccggagagggctggccactggtcctgaagcattctgtggacgccacg
tacgaagaccagggccccagcccgggtttccgcatggagacgtcgatcttctatgtggtc
tatttcgtggtgtttccgttcttcttcgtcaacatttttgtagctttgatcatcatcacc
ttccaggagcagggagataaggcgatgtcggagtgcagcttggagaagaacgagagggcc
tgtatcgacttcgccatcaacgccaggccgcttacacgatacatgccagagaacaagcag
tccttccagtacaagatgtggaagttcgtggtgtcgtcacctttcgagtacgccatcatg
actttaatcgccctcaacaccgtcgtcctgatgatgaagttctatggagctccaatggtg
tacgagtctatgctgaaatacctcaacatcgtcttcactggcctcttcacactagagtgc
atcctcaagattattgctttcaatccactgaactacctgaaggaaccctggaatgtgttt
gactttgtgacggtgattgggagcatcacggacattttgttcacagagataaatacgaac
aagatgataaacctgagtttcctgaggctgttcagagctgctcgcctcatcaagctgctg
cgccagggctacaccatccgcatcctgctttggaccttcgttcagtccttcaaggctctg
ccgtacgtctgcctgctgatcgccatgctgttcttcatctacgccatcattggcatgcag
gtgtttgggaacatcgagttgaatgaagagacctccataaatcaccacaacaacttccag
accttcttccaggccctgaccctcctgttcaggagtgcaacaggcgaggcgtggcatgag
atcatgctggcctgcctcagtaaccggccgtgtgataaactctcaggaagttcagggaag
gactgcggcagcgatttcgcctacttctacttcgtgtccttcatcttcctctgctccttc
ctgatgttgaatctgttcgttgccgtcatcatggacaactttgagtatctaactcgggac
gcctccatcctcgggccgcaccacctggacgagttcatccgcgtgtgggcagagtacgac
cccgccgcctgtgggaggatttgctatcgggacatgtacaaattattgcgtttaatctcg
cctcccctgggcctggggaagaagtgccccaacagggtggcttacaagcgcctggtgagg
atgaacatgccaatcgcagacgacaacacggtccatttcacctccacgctgatggctctg
atccggaccgcgctggagatcaagctggcatccggcgtgctggcgcagcgtctgtgcgac
gccgacctgaagcgggagatccgccgcgtttggcccaacctgcagcagaagaccatcgac
ctgctggtcacgcctcataagtacaacgagttgactgtggggaaagtttatgctgcccac
atgatctttgactactacaaacagaaccgagccaagaagctccagcagcagaacccatct
gggatctctcagagtaagctgggcgctctgttccgccccgttctgcccttcactcatcta
cacgagccgacgccgccgatcaaaccggctccgccaccagaaccggaacccagaacacaa
gccccgcccacttccaccagcagcaccgccaccaatgtggacgccaacatggacgccaat
gtctctgtttcccctcccagtctgaaccagaggacttccattaaacattcccagtctgga
gatttttccccggcggccgcgaggctgaagccgcaccggcggctgcagagaggccagtca
gaggacgtccaccgctgcagcagagctcaggagcggcaggccgacccgaagccggagaac
atgtctgatgcagagggccggcccggcctggagggccacgccagagccgcatcgctgcca
cgcctaaacgcagaataccaccggagccaccctcgccacgcccccgggacccacctggca
ccgatcgttgacctcagcccaataaaacgctcggcatcatcgctgacgccccagcaggtc
gggttgagggactacgacctggagcgggtcgaccagagccggttctgcgccggaccggac
ccggaccggacccaccaccaccaccaccatcaccgctgccaccgccgcagagacaaggac
aaagacaggaagcagaagtctctggacaaaacgtcctcagcgccgccgtccggcaccgtc
ggttcgtttgaagacccgtcagccgacggtttgtccagagagcgagcgagggagcgggac
cgcagccgcccccatgagaggaggcaccactcctccgccggggagaagcagcgctactac
tcctgcgagcgctatggcaacagggagccgggtcaggcccggtcggccggcccgagccgg
tccacgtctccgggagagagccaggactctgggctcatcaaacagcagggaagcactgtg
acgaagctgccgtctggtaccagcgctcaggcccgtgggcgccgccagctgccccagacg
ccgctcacgcctcggcccgccgtggcctacaagacccccacctcctcagccgctccgccc
agcgcctccacgcccgggtctcgcttcgtccgcggcgcatcggagcacgaccgcctgcta
gcggctcacgaggagcccaaagccccagctggtccggactctaacccgagccggcagcag
ctggactcgtccctgctggaggagggcgaggacttccaggatgctgtgagcagccacggg
gggggacactcctccagaagcgccacaacgccatccaccgccgccgcacaggggcgggca
gcgggagtgccgaacggctaccacttcaccctggggtctgcgccgggcagcagcaggggg
gcggcgggtctcagggagcgggaggaggaggactggtgctag
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integrated database retrieval system
