Gambusia affinis (western mosquitofish): 122846992
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Entry
122846992 CDS
T07758
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122846992
Pattern recognition receptors [BR:
gaf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122846992
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
AFG1_ATPase
LRR_1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
122846992
NCBI-ProteinID:
XP_044000266
LinkDB
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Position
LG17:23018765..23184053
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AA seq
983 aa
AA seq
DB search
MLLEDNIVTFVKKELKKIQKVLSPDYPECSESQRDDEVLEGEDEEQRRSSREAVMKITLN
FLRRMKQEELADRLQSRHFAPVCQHQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYI
TEGGTGEVNDEHEVRQIETSSRKPDRPETTIRQEDIFKVQTEKDQPIRTVMTKGVAGIGK
TVLTQKFTLDWAEDKAHQNIQFIFPFTFRELNVLKEKKFSLVELVHHFFTETKEICSFEH
FQVLFIFDGLDESRLPLDFHNKEILTDATESTSVDVLLTNLIRGKLLPSALLWITTRPAA
ANQIPPQCVGMVTEVRGFNDPQKEEYFRKRFRDEEQASRIISHMKTSRSLHIMCHIPVFC
WITATVLEDVLETREGGELPRTLTEMYIHFLVVQTKVKKVKYDGGAETDPHWSPESRKMI
ESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVH
LSVQEFLAALHVHLTFISSGTDVMKETQRSKKSSLLSKSDLKSLHQRAVDQALQSPNGHL
DLFLRFLLGLSLQTNQRLLQGLLTKTGSSSQTNQETVQYIKEKISENVSAEKSINLFHCL
NELNDRSLVEEIQQSLSSGSLSTDKLSPAQWSALGFILVSSGKDLDVFDLKKYSASEEVL
LRLLPVVKASNKALLSDCNLSQRSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAG
LKSPNCNLETLRLSGCLVSEEGCASLASALTSNPSHLKELDLSYNHPGDSGVKLLWAGLK
DPHWRLEALRVEPAGVQFLTPGLRKYSCQLTIDTNTVNRKLKLSEDNRKVTNLVELQSYP
DHPDRFDNRNQLLCRTGLTGRCYWEVEWRGDVDISVSYRRIRRKGNSGDCWFGWNDHSWS
LRCSDDDGYSVWYNNIQTRLSSSSVSNRVSVYVDCPAGILSFYRVSSDSLILLHTFNTKF
TEPLIPGFGFWWSSSGSSSVFLC
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggaggacaacattgtcacttttgtgaagaaagaactgaagaagatccagaaa
gttctgagtccagattacccagaatgttcagagagtcagagagatgatgaggtgttggaa
ggtgaagatgaagagcagaggaggagcagcagagaggcagtgatgaagatcacactgaac
ttcctgaggagaatgaagcaggaggagctggctgatcgtttgcagagcagacattttgct
ccagtttgtcaacatcaacttaaatctggtctgaagaagaagttccagtctgtgtttgag
gggattgctaaagcaggaagtccaacccttctgaaccagatctacacagagctctacatc
acagagggagggactggagaggtcaatgatgaacatgaggtcagacagattgaaacatca
tccaggaaacctgacagaccagaaacaacaatcagacaagaagacatctttaaagtccaa
actgaaaaagatcaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaa
acagtcttaacacagaagttcactctggactgggctgaagacaaagcccaccagaacatc
cagttcatatttccattcacattcagagagctgaatgtgctgaaagagaaaaagttcagc
ttggtggaacttgttcatcacttctttactgaaaccaaagaaatctgcagctttgaacac
ttccaggttctgttcatctttgatggtttggatgagagtcgacttcctctggacttccac
aacaaggagatcctgactgatgctacagagtccacctcagtggatgttctgctgacaaac
ctcatcagggggaaactgcttccctctgctctcctttggataaccacacggcctgcagca
gccaatcagatccctcctcaatgtgttggcatggtgacagaggtcagagggttcaatgac
ccacagaaggaggagtacttcaggaagagattcagagatgaggagcaggccagcaggatc
atctcccacatgaagacatcacgaagcctccatatcatgtgccacatcccagtcttctgc
tggatcactgctacagttctggaggatgtgttggagaccagagagggaggagagctgccc
agaaccctgactgagatgtacatccacttcctggtggttcagaccaaagtgaagaaggtc
aagtatgatggaggagctgaaacagatccacactggagtccagagagcaggaagatgatt
gagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttctatgaa
tcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttc
acacagatctttaaagaggagagaggtctgtaccaggacaaggtgttctgcttcgtccat
ctgagtgttcaggagtttttggctgctcttcatgttcatctgacctttatcagctctggt
actgatgtgatgaaagaaacacaaagatctaagaagtcttcattacttagtaaatctgac
ctaaaatctctccatcagagagctgttgatcaggccttacagagtccaaatggacacctg
gacttgttcctccgcttcctcctgggactttcactgcagaccaatcagagactcctacaa
ggtctgctgacaaagacaggaagtagctcacagaccaatcaggaaacagttcagtacatc
aaggagaagatcagtgagaatgtgtctgcagagaaaagcatcaatctgttccactgtctg
aatgaactgaatgatcgttctctagtggaggagatccaacagtctctgagttcaggaagt
ctctccacagataaactgtctcctgctcagtggtcagctctgggtttcatcttagtgtca
tcaggaaaagatctggatgtgtttgacctgaagaaatactctgcttcagaggaggttctt
ctgaggctgctgccagtggttaaagcctccaacaaagctctactgagtgactgtaacctc
tcacagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctcaga
gaactggacctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgctgga
ctgaagagtccaaactgcaacctggaaactctcagattatcaggctgtttggtatcagag
gaaggctgtgcttctctggcctcagctctgacctccaacccctcccatctgaaagagttg
gacctgagctacaatcatccaggagactcaggagtgaagctgctgtgggctggactgaag
gatccacactggagactggaagctctcagggtggagcctgctggagtccaattcctgaca
ccaggtctgaggaagtattcctgtcaactcaccatcgacacaaacacagtgaacagaaaa
ctcaaactgtctgaagacaacaggaaggtgacaaatttggtggagcttcagtcatatcct
gatcatccagacagatttgataacaggaatcagctgctgtgtagaactggtctgactggt
cgctgttactgggaggtcgagtggagaggagatgttgatatatcagtgagttacagaaga
atcaggaggaaaggaaacagtggagactgttggtttggatggaatgatcattcctggagt
ctgagatgctctgatgatgatggttactctgtctggtacaataacatacaaactcgtctc
tcctcctcctctgtctctaacagagtatcagtgtatgtggactgtcctgctggcattctg
tccttctacagagtttcctctgactcactgatcctcctccacaccttcaacaccaaattc
actgaacctctgattcctggatttgggttctggtggtccagttctggttcctcttcagtg
tttctgtgctga
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