Gambusia affinis (western mosquitofish): 122846993
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Entry
122846993 CDS
T07758
Symbol
tmc2a
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gaf02000
]
122846993 (tmc2a)
03037 Cilium and associated proteins [BR:
gaf03037
]
122846993 (tmc2a)
Transporters [BR:
gaf02000
]
Other transporters
Pores ion channels [TC:
1
]
122846993 (tmc2a)
Cilium and associated proteins [BR:
gaf03037
]
Other cilia and associated proteins
Stereociliary proteins
122846993 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Arc_capsid_dom
Motif
Other DBs
NCBI-GeneID:
122846993
NCBI-ProteinID:
XP_044000268
LinkDB
All DBs
Position
LG17:22954651..22968585
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AA seq
948 aa
AA seq
DB search
MPRRSAAAEDVGIEIDEDGSDSDDGGNRRKANRRPAGGRGGGGRGRGRGRGRGKKPGSDE
EEDDEDEAPKGRGRGGNRRKPGNKRGGGKNKDDDDDSEDESPKKKRGGAANRKKGGKAQD
SDEDDSDDGKGKRGKKGGKKGGKEEESGKGKKGDAKGKDKGKDKDDDKKKKKKKGDSSSD
SNSNSDEEEESMSEGEMARLMEEVEEKKKLIATIRNKPWRMKRRLVLLKEAQQFVDKFEG
ALGKGKGRKWYAYKVMMTKKWIKFQRDFENFRTACIPWERKIKEVESHFGSSVASYFIFL
RWMYGMNLVLFGLTFGLVVIPEVLMGLPYGSIPRKTVPRAEQDTAQDYSVLMDFNGYCKY
SVLFYGYYDDKRTIGPLKFRLPLSYLLVGIGSFGYSLMLVIRTMAKNADVGGGDGEEGEF
TFAWKMFTSWDYLIGNSETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANFL
ITCSLGGSGYLIYFVVKRSQEFANRDDLSWYEKNELEIIMSLLGLVCPPLFETIAELEDY
HPRIALKWQLGRIFALFLGNLYTFLFALFDEVNSKLDEEQSIKNASIWAMKEYYANYSRL
LNDSDATPPPMSPADVIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRFLN
YCWCWDLEAGFPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQCW
AVMATNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGRAKMF
DVIMETIRLDLPAFMGTLFSYAANPGLIIPAVLLMVLAIYYLNSVSEAYQNSNMELKKKM
QMARDEEKNRRNNKDSTNQVMKDLEDLLPNRSLSPPPEPEKPPEPEPKPTKTKPGSAGKG
VNLQKDVALASSNPNVRGPVDRPPGPRGPGPGPGAGRGRGRGRGAPPS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaagaagcgcagcggccgaggacgtcggaatcgagatagatgaagatgggagc
gacagcgatgacggcggcaaccggaggaaagcgaacaggaggccggcaggtggacgagga
ggaggaggaaggggaagaggaagaggaagaggaagaggaaagaagcccggcagcgacgaa
gaggaagacgatgaagatgaggctccaaagggacgaggaagaggaggaaacaggaggaag
cccggcaataaacgaggcggcggtaagaacaaagacgatgatgatgacagcgaagatgag
tctcccaagaagaagagaggaggagcagcaaaccggaagaaaggcggtaaagcccaagac
agtgatgaagacgacagcgatgacgggaaaggaaagagaggaaagaaaggagggaagaaa
ggagggaaggaggaggagagcgggaagggaaagaaaggtgacgccaaaggaaaagacaaa
gggaaagacaaagatgacgacaagaagaagaaaaagaagaagggtgacagttcgtcggac
tccaactcgaactcagacgaggaggaggagtccatgtcagagggggagatggcacggcta
atggaggaggtggaggagaagaagaaactgatcgccaccatcaggaacaagccttggcgg
atgaagcggcggctcgttctcttaaaggaagctcaacaatttgtggataagtttgaaggt
gctctgggaaaaggaaaaggcaggaagtggtatgcctacaaagtgatgatgacgaagaaa
tggattaagtttcagagagattttgagaatttcagaacagcctgcatcccctgggagagg
aagattaaagaggtggaaagccacttcggatcgtcagttgcttcttacttcatcttcctg
cgatggatgtacggcatgaatctcgtcctgtttggtctgacctttggactcgtcgtcatt
cctgaggtcctcatgggtctcccttatgggtccattcccagaaagacggtaccgagagca
gagcaggacacggctcaggattattcagttctcatggatttcaacggatactgtaaatac
tcagtcctgttctacggatattacgacgacaagagaaccattggtccactaaagttcagg
ttgcctctgtcctacctcttggtgggaatcgggagcttcggatacagcctgatgctggtg
atccggacaatggctaaaaatgctgacgtcggcggaggagacggggaagaaggcgagttc
accttcgcctggaagatgttcaccagttgggactacctcatcggcaattccgaaaccgct
gacaacaagtacgcctccatcaccaccagcttcaaggaatccatcgtggacgagcaagag
aaccagaaggacgagaacatccacctgcggcggtttctccgggttctggccaacttcctg
atcacctgcagtctcggcggcagtgggtacctcatctactttgtggtgaagagatcgcag
gaatttgccaacagggatgacctcagttggtatgagaagaatgagttggagatcatcatg
tccctgctgggtttggtgtgtccacctctgtttgagaccattgccgaactggaggactac
catcctcgaatcgccctgaagtggcagctggggcgcatcttcgccctcttccttggaaac
ctctacaccttcctgttcgccttgtttgatgaggtcaacagtaagctggacgaggaacag
tccatcaagaacgcctccatctgggccatgaaggagtactacgccaactactcgcgcttg
ctcaacgattcggacgccacgccgcctcccatgagcccggctgacgtcatcagaggcccc
tgctgggagacggcagtcggcatagagtttgtgaaactgaccgtctcagacatccaggtg
acctacctgaccatcctgatcggcgacttcgcccgcgccgtcatcgttcgtttcctcaac
tactgctggtgctgggacctggaggctggatttccgtcgtacggagagtttgacatcagt
ggaaatgttctgggtctggtcttcaaccaggggatgatctggatgggagcgttttacgcc
ccggggctggtgggcatcaacgtgctccgcctcctcagctccatgtactaccagtgctgg
gccgtcatggccaccaacgtcccgcatgagagagtcttcaaggcctccaagtccaacaac
ttctacatggggctcctgctgctcatcctcttcttgagcctcctgcccgtcgtttacacc
atcatgacgctgccgccgtcgttcgactgcggccccttcagcggacgggcgaagatgttc
gatgtgatcatggagacgatcaggctggatctgccggccttcatggggactctgttcagc
tacgcagcgaatcccggactcatcatcccggccgtgctgctcatggtgctggccatctat
tatctgaactcagtctccgaagcttatcaaaactcaaacatggaactgaagaagaagatg
cagatggcccgtgatgaagagaagaaccggagaaataacaaagacagcaccaaccaggtg
atgaaagacctggaggacctgctgcccaaccggtccctcagtccgccgccggagcccgaa
aaaccaccagaaccggagccgaaacccaccaaaacaaaacctggttctgctggaaaagga
gtaaacttacagaaggacgtggctctggcttcttccaacccaaacgttcgagggccggta
gaccggccaccaggaccgagaggacccggtccgggtccgggtgctggacggggccgaggc
cgtgggagaggagcccctcccagttaa
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