Gambusia affinis (western mosquitofish): 122847050
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Entry
122847050 CDS
T07758
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122847050
Pattern recognition receptors [BR:
gaf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122847050
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
122847050
NCBI-ProteinID:
XP_044000345
LinkDB
All DBs
Position
LG17:complement(22797569..22815809)
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AA seq
1171 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPEPSCVSFKSDWSKGEAIDF
KSPGSQPSERFKPEPEPEPSCVSLKSDGSMDNPVVDFKSPGPPSSERMDQQNSEVPSGPS
VQQHQTQLDSIFMLLEDNIVTFVKKELKMIQKVLSPDYPGHSESQRDDEVLEGDDEEKRR
SSREAVMKITLNFLRRMKQEELAHRLQTRHFAAVCQHQLKSGLKKRFQSVFEGIAKAGSP
TLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKPDRPETTIRQEDIFKVPPGRDQPIR
TVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIFPFTFRELNVLKEKKFSLVELVHHF
FTETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTDATESTSVDVLLTNLIRGKLLP
SALLWITTRPAAANQIPPQCVGMVTEVRGFNDPQKEEYFRKRFRDKKQASRIISHMKTSR
SLHIMCHIPVFCWITATVLEDVLETREGGDLPSTLTEMYIYFLVVQTKVKKVKYDGGAET
DPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEER
GLYQDKVFCFVHLSVQEFLAALHVHLTFINSGSDVLKETQRSKKSSLLSKSDLKSLHQRA
VDQALQSPNGHLDLFLRFLLGLSMQTNQRVLQGLMTQTGSSSQTNQKTVQYIKKIISKKV
SAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDKLSPAQWSALIFILMSSGKDLDVF
DLKKYSASEEVLLRLLPVVKASNKALLSGCKLSERSCEALSSVLSSQSSSLRELDLSNNN
LQDSGVKLLSAGLKSPNCNLETLRLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQ
DSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLASALTSNPSHLKELDLSYNHPGDS
GVKLLWAGLKDPHWRLEALRVEPAGVRFLTPGLRKYSCQLTIDTNTVNRKLKLSEDNRKV
TLVEELQSYPDHPDRFDNWNQLLCRTGLTGRCYWEVEWRGGVDISVSYRRIRRKGNSRDC
LFGGNDHSWSLRCSDVYGFSVWHNNIETRLSSSSVSNRVSVYVDCPAGILSFYRVSSDSL
ILLHTFNTKFTEPLIPGFGVWSSSGSSVFLC
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaacccagctgtgtgtcctttaagagtgactggtctaaaggtgaggccattgacttt
aaatctcctggatctcaaccatcagagagattcaaaccagaaccagaaccagaacccagc
tgtgtctccttgaagagtgatggatcaatggataatcctgttgttgactttaaatctcct
ggacctccatcatcagagagaatggaccagcagaactcagaggtccccagtggtccgtct
gtccagcagcatcaaacacagctggactccatatttatgctgctggaggacaacattgtc
acttttgtgaagaaagaactgaagatgatccagaaagttctgagtccagattacccagga
cattcagagagtcagagagatgatgaggtgttggaaggtgatgatgaagagaagcggaga
agcagcagagaggcagtgatgaagatcacactgaacttcctgaggaggatgaagcaggag
gagctggctcaccgtttgcagaccagacattttgctgcagtttgtcaacatcaacttaaa
tctggtctgaagaaaaggttccagtctgtgtttgaggggattgctaaagcaggaagtcca
acccttctgaaccagatctacacagagctctacatcacagagggagggactggagaggtc
aatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaa
acaacaatcagacaagaagacatctttaaagtcccacctggaagagatcaaccaatcaga
acagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcact
ctggactgggctgaagacaaagcccaccagaacatccagttcatatttccattcactttc
agagagctgaatgtgctgaaagagaaaaagttcagcttggtggaacttgttcatcacttc
tttactgaaaccaaagaaatctgcagctttgaacacttccaggttctgttcatctttgat
ggtttggatgagagtcgacttcctctggacttccacaacaaggagatcctgactgatgct
acagagtccacctcagtggatgttctgctgacaaacctcatcagggggaaactgcttccc
tctgctctcctctggataaccacacgacctgcagcagccaatcagatccctcctcagtgt
gttggcatggtgacagaggtcagagggttcaatgacccacagaaggaggagtacttcagg
aagagattcagagataagaaacaggccagcaggatcatctcccacatgaagacatcacga
agcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggag
gatgtgttggagaccagagagggaggagatttgcccagcaccctgactgagatgtacatc
tacttcctggtggttcagaccaaagtgaagaaggtcaagtatgatggaggagctgaaaca
gatccacactggagtccagagagcaggaagatgattgagtctctgggaaaactggctttt
gatcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagagtgtggcatc
gatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaagaggagaga
ggtctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggct
gctcttcatgttcatctgaccttcatcaactctggttctgacgtgctgaaagaaacacaa
agatctaagaagtcttcattacttagtaaatctgacctaaaatctctccatcagagagct
gttgaccaggccttacagagtccaaatggacacctggacttgttcctccgcttcctcctg
ggactttcaatgcagaccaatcagagagtcctacaaggtctgatgacacagacaggaagt
agctcacagaccaatcagaaaacagttcagtacatcaagaaaataatcagtaaaaaagtg
tctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgttctcta
gtggaggagatccaacagtctctcagttcaggaagtctctccacagataaactgtctcct
gctcagtggtcagctctgatcttcatcttaatgtcatcaggaaaagatctggatgtgttt
gacctgaagaaatactctgcttcagaggaggttcttctgaggctgctgccagtggttaaa
gcctccaacaaagctctactgagtggctgtaaactctcagagagaagctgtgaagctctg
tcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaacaacaac
ctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaacctg
gaaactctcagactgagtggctgtaacctctcagagagaagctgtgaagctctgtcctca
gttctcagctcccagtcctccagtctcagagaactggacctgagtaacaacaacctgcag
gattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaacctggaaact
ctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctggcctcagctctg
acctccaacccctcccatctgaaagagttggacctgagctacaatcatccaggagactca
ggagtgaagctgctgtgggctggactgaaggatccacactggagactggaagctctcagg
gtggagcctgctggagtccgattcttgacaccaggtctgaggaagtattcctgtcaactc
accatcgacacaaacacagtgaacagaaaactcaaactgtctgaagacaacaggaaggtg
acattagtggaggagcttcagtcatatcctgatcatccagacagatttgataactggaat
cagctgctgtgtagaactggtctgactggtcgctgttactgggaggtcgagtggagagga
ggagttgatatatcagtgagttacagaagaatcaggaggaaaggaaacagtagagactgt
ttgtttggagggaatgatcattcctggagtctgagatgctctgatgtttatggtttctct
gtttggcacaataacatagaaactcgtctctcctcctcctctgtctctaacagagtatca
gtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctctgactcactg
atcctcctccacaccttcaacaccaaattcactgaacctctgattcctggatttggggtc
tggtccagttctggttcttcagtgtttctgtgctga
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