Gambusia affinis (western mosquitofish): 122847051
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Entry
122847051 CDS
T07758
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122847051
Pattern recognition receptors [BR:
gaf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122847051
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
122847051
NCBI-ProteinID:
XP_044000346
LinkDB
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Position
LG17:22555794..22607904
Genome browser
AA seq
1255 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKSEPEPEPSCMSFKSDRSMDVIINF
KSPGSPPSERIHQRLKPEPEPEPEPSCVSFKSDRSKDFLIKFKSPPPLPPKRIHQRLKPE
PEPEPSCVSFKSDRSKDFLIKFKSPPPLPPKRIHQRLTPEPEPSCVSFRSNRSKDDPIDF
KSPGSPPSWRVDKQSSEVHRDLSTQQHQTQLDSIFMLLEDNIVSFVKNELKKIQKVLSPD
YTECSESQKDDEVLEGEEEEQRRSSREAVMKITLNFLRRMKHEKLADRLTNKHLATVCQH
QLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRKSN
RPETTIRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQFIFP
FTFRELNVLKEKKFSLVELVHHFFSETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEIL
TDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVGMVTEVRGFNDPQKEE
YFRKRFRDEEQASRIISHMKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPRTLTE
MYIHFLVVQTKVKKVKYDGGAETDPHWSPESRKMIKSLGKLAFDQLQKGNLIFYESDLTE
CGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHRTFINCRVNLMN
KTQTSKKFLSINKPKVKVLHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLLTQ
TESSSQTNQETVQYIKKKISENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDK
LSPAQWSALGFILVSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKALLSGCNLSERSC
EVLSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLRLSDCNISERSCEV
LSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLA
SALTSNPSHLKELDLSYNHPGDSGVKLLWAGLKDPHWRLEALRVEPAGVRFLTPGPWRLK
RYSCQLTIDTNTVNRKLKLSEDNRKVTCVKELQSYPDHPDRFDNWNQLLCRTGLTGRCYW
EVEWRGDVDISVSYRRIRRKGNSRDCLFGYNDHSWSLICSNDGFSVCHNNRETRLSSSSV
SNRVSVYVDCPAGILSFYRVSSDSLILLHTFNTKFTEPLIPGFGFCFYGSSVFLC
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaatcagaaccagaa
ccagaacccagctgtatgtcctttaaaagcgacaggtcaatggatgtgatcattaacttt
aaatctcctggatctccaccatcagagaggatccatcagagactcaaaccagaaccagaa
ccagaaccagaacccagctgtgtgtcctttaagagtgacaggtcaaaggattttctcatt
aaatttaaatctcctccacctctaccaccaaaaaggatccatcagagactcaaaccagaa
ccagaaccagaacccagctgtgtgtcctttaagagtgacaggtcaaaggattttctcatt
aaatttaaatctcctccacctctaccaccaaaaaggatccatcagagactcacaccagaa
ccagaacccagctgtgtgtccttcaggagcaacaggtcaaaggatgatcccatcgacttt
aaatctcctggatctccaccatcatggagagtggacaagcagagttcagaggttcataga
gatctgtctacccagcagcatcaaacacagctggactccatatttatgctgctggaggac
aacattgtcagttttgtgaagaacgagctgaagaagatccagaaggttctgagtccagat
tacacagaatgctcagagagtcagaaagatgatgaggtgttggaaggtgaggaagaagaa
cagaggaggagcagcagagaggcagtgatgaagatcacactgaacttcctgaggaggatg
aagcatgaaaagctggctgaccgactgacgaacaaacatcttgctacagtttgtcaacat
caacttaaatctggtctgaagaagaagttccagtctgtgtttgaggggattgctaaagca
ggaagtccaacccttctgaaccagatctacacagagctctacatcacagagggagggact
ggagaggtcaatgatgaacatgaagtcagacagattgaaacagcatccaggaaatcaaac
agaccagaaacaacaatcagacaagaagacatatttaaagtcccacctggaagagatcaa
ccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacag
aagttcactctggactgggctgaagacaaagcccaccagaacatccagttcatatttcca
ttcaccttcagagagctgaatgtgctgaaagagaaaaagttcagtttggtggaacttgtt
catcacttctttagtgaaaccaaagaaatctgcagctttgaacacttccaggttctgttc
atctttgatggcttggatgagagtcgacttcctctggacttccacaacaaggagatcctg
actgatgctacagagtccacctcagtggatgttctgctgacaaacctcatcagggggaaa
ctgcttccctctgctctcctctggataaccacacgacctgcagcagccaatcagatccct
cctcagtgtgttggcatggtaacagaggtcagagggttcaatgacccacagaaggaggag
tacttcaggaagagattcagagatgaggagcaggccagcaggatcatctcccacatgaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgttggatcactgctaca
gttctggaggatgtgttggagaccagagagggaggagagctgcccagaaccctgactgag
atgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgatggagga
gctgaaacagatccacactggagtccagagagcaggaagatgatcaagtctctgggaaaa
ctggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaa
gaggagagaggtctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggag
tttctggctgctcttcatgttcatcggaccttcattaactgtagggtcaacctgatgaat
aaaacacaaacgtctaagaaatttttatcaattaataaacctaaagtaaaagttctccat
cagagagctgttgaccaggccttacagagtccaaatggacacctggacttgttcctccgc
ttcctcctgggactttcactgcagaccaatcagagactcctacaaggtctgctgacacag
acagaaagtagctcacagaccaatcaggaaacagttcagtacatcaagaagaagatcagt
gagaatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgat
cgttctctagtggaggagatccaacagtctctgagttcaggaagtctctccacagataaa
ctgtctcctgctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaagatctg
gatgtgtttgacctgaagaaatactctgcttcagaggaggttcttctgaggcttctgcca
gtggttaaagcctccaacaaagctctactgagtggctgtaacctctcagagagaagctgt
gaagttctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagt
aacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaac
tgcaacctggaaactctcagactgagtgactgtaacatctcagagagaagctgtgaagtt
ctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctgagtaacaac
aacctgcaggattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaac
ctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctggcc
tcagctctgacctccaacccctcccatctgaaagagttggacctgagctacaatcatcca
ggagactcaggagtgaagctgctgtgggctggactgaaggatccacactggagactggaa
gctctcagggtggagcctgctggagtccgattcctgacaccaggtccatggagactgaag
agatattcctgtcaactcaccatcgacacaaacacagtgaacagaaaactcaaactgtct
gaagacaacaggaaggtgacatgtgtgaaggagcttcagtcatatcctgatcatccagac
agatttgataactggaatcagctgctgtgtagaactggtctgactggtcgctgttactgg
gaggtcgagtggagaggagatgttgatatatcagtgagttacagaagaatcaggaggaaa
ggaaacagtagagactgtttgtttggatataatgatcattcctggagtctgatctgctct
aatgatggtttctctgtctgtcacaataacagagaaactcgtctctcctcctcctctgtc
tctaacagagtatcagtgtatgtggactgtcctgctggcattctgtccttctacagagtt
tcctctgactcactgatcctcctccacaccttcaacaccaaattcactgaacctctgatt
cctggatttgggttctgtttttatggttcctcagtgtttctgtgctga
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