Gambusia affinis (western mosquitofish): 122847053
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Entry
122847053 CDS
T07758
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122847053
Pattern recognition receptors [BR:
gaf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122847053
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
122847053
NCBI-ProteinID:
XP_044000347
LinkDB
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Position
LG17:22647577..22678837
Genome browser
AA seq
1140 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPEPEPEPSCVSFKSDRSKGF
LIDFKSPGSPPSERVDQQSSEDPSGQSVQQDQTQLDSIFMLLEDNIVTFVKKELKKIQKV
LNPDNPEYSESQTDDDEVLPGENEEQRRSSREAVMKITLNFLRRMKQEELADRLQRKHFA
AFCQHQLKSGLEKKFHSVFEGIAKAGSPTLLNQIYTELYITERGTGEVNDEHEVRQIETA
SRKTNRPETTIRQEDIFKVPPGKDQPIKTVMTKGVAGIGKTVLTQKFTLDWAEDKAHKNI
QFIFPFTFRELNVLKEKKFSLVEFVHHFFPETKEICSFEHFQVLFIFDGLDESRLPLDFH
NKEILTDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAASQIPPHCVGMVTEVRGFSD
PQKEEYFRKRFRDEEKASRIISYMKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELP
RTLTEMYIYFLVVQTKVKKVKYDGGAETDPHWSPESRKTIESLGKLAFDQLQKGNLIFYE
SDLTECGIDIRAASVYSGVFTQIFKEERSLYQDKVFCFVHLSVQEFLAALHVHLTFINSG
INLMEETQTSRNTALFNKPKIISLHQRAVNQALQSPNGHLDLFLRFLLGLSLQTNQRLLQ
GLLTQTGSSSQTNQETVQYIKKKISENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGS
LSTDKLSPAQWSALGFILVSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKALLSDCNL
SERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLRLSGCNLSE
RSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEG
CASLASALTSNPSHLKELDLSYNHPGDSGVKLLWAGLKDPHWRLEALRVEPAGVRFLTPG
LRKYSCQLTIDTNTVNRNFKLSEDNRKVTLVKEFQSYPDHPDRFDKWYQLLCRTGLTGRC
YWEVEWRGEVYISVSYRRIRRKGNSRDCLFGWNDHSWSLRCSDDVGYSVWHNNIETRLSS
SSVSNRVSVYVDCPAGILSFYRVSSDSLILLHTFNTKFTEPLIPGFGVWWSSSGSSVFLC
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaaccagaaccagaacccagctgtgtgtcctttaagagtgacaggtcaaagggtttt
ctcattgactttaaatctcctggatctccaccatcagagagagtggaccagcagagctca
gaggatcccagtggtcagtctgtccagcaggatcaaacacagctggactccatatttatg
ctgttggaggacaacattgtcacttttgtgaagaaagaactgaagaagatccagaaggtt
ctgaatccagataacccagaatactcagagagtcagacagatgatgatgaggtgctgcca
ggtgaaaatgaagaacagaggaggagcagcagagaggcagtaatgaagatcacactgaac
ttcctgaggagaatgaagcaggaggagctggctgaccgtctgcagagaaaacattttgct
gcattttgtcaacatcaacttaaatctggcctggagaagaagttccattctgtgtttgag
gggattgctaaagcaggaagtccaacacttctgaaccagatctacacagagctctacatc
acagagagagggactggagaggtcaatgatgaacatgaggtcagacagattgaaacagca
tccaggaaaacaaacagaccagaaacaacaatcagacaagaagacatctttaaagtccca
cctggaaaagatcaaccaatcaaaacagtgatgacaaagggagtggctggtattggaaaa
acagtcttaacacagaagttcactctggactgggctgaagacaaagcccacaagaacatc
cagttcatatttccattcactttcagagagttgaatgtgctgaaagagaaaaagttcagc
ttggtggaatttgttcatcacttctttcctgaaaccaaagaaatctgcagctttgaacac
ttccaggttctgttcatctttgatggcttggatgagagtcgacttcctctggacttccac
aacaaggagatcctgactgatgctacagagtccacctcagtggatgttctgctgacaaac
ctcatcagggggaaactgcttccctctgctctcctctggataaccacacgacctgcagca
gccagtcagatccctcctcattgtgttggcatggtaacagaggtcagagggttcagtgac
ccacagaaagaggagtacttcaggaagagattcagagatgaggagaaggccagcaggatc
atctcctacatgaagacatcacgaagcctccacatcatgtgccacattccagtcttctgc
tggatcactgctacagttctggaggatgtgttggagaccagagagggaggagagctgccc
agaaccctgactgagatgtacatctacttcctggtggttcagaccaaagtgaagaaagtc
aagtatgatggaggagctgaaacagatccacactggagtccagagagcaggaagacaatt
gagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttctatgaa
tcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttc
acacagatctttaaagaggagagaagtctgtaccaggacaaggtgttctgctttgtccat
ctgagtgttcaggagtttctggctgctcttcatgttcatctgaccttcatcaactctgga
atcaacctgatggaagaaacacaaacatctaggaatactgcattatttaataaacctaaa
ataatttctctccatcagagagctgtcaatcaggccttacagagtccaaatggacacctg
gacttgttcctccgcttcctcctgggactttcactgcagaccaatcagagactcctacaa
ggtctgctgacacagacaggaagtagctcacagaccaatcaggaaacagttcaatacatc
aagaagaagatcagtgagaatgtgtctgcagagaaaagcatcaatctgttccactgtctg
aatgaactgaatgatcgttctctagtggaggagatccaacagtctctgagttcaggaagt
ctctccacagataaactgtctcctgctcagtggtcagctctgggtttcatcttagtgtca
tcaggaaaagatctggatgtgtttgacctgaagaaatactctgcttcagaggaggttctt
ctgaggctgctgccagtggttaaagcctccaacaaagctctactgagtgactgtaacctc
tcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctcaga
gaactggacctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgctgga
ctgaagagtccaaactgcaacctggaaactctcagactgagtggctgtaacctctcagag
agaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactg
gacctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaag
agtccaaactgcaacctggaaactctcagcttatcaggctgtttggtctcagaggaaggc
tgtgcttctctggcctcagctctgacctccaacccctcccatctgaaagagttggacctg
agctacaatcatccaggagactcaggagtgaagctgctgtgggctggactgaaggatcca
cactggagactggaagctctcagggtggagcctgctggagtccgattcctgacaccaggt
ctgaggaagtattcctgtcaactcaccatcgacacaaacacagtgaacagaaacttcaaa
ctgtctgaagacaacaggaaggtgacacttgtgaaggagtttcagtcatatcctgatcat
ccagacagatttgataaatggtatcagctgctgtgtagaactggtctgactggtcgctgt
tactgggaggtcgagtggagaggagaagtttatatatcagtgagttacagaagaatcagg
aggaaaggaaacagtagagactgtttgtttggatggaatgatcattcctggagtctgaga
tgctctgatgatgttggttactctgtctggcacaataacatagaaactcgtctctcctcc
tcctctgtctctaacagagtatcagtgtatgtggactgtcctgctggcattctgtccttc
tacagagtttcctctgactcactgatcctcctccacaccttcaacaccaaattcactgaa
cctctgattcctggatttggggtctggtggtccagttctggttcctcagtgtttctgtgc
tga
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