Gambusia affinis (western mosquitofish): 122847054
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Entry
122847054 CDS
T07758
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122847054
Pattern recognition receptors [BR:
gaf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122847054
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
AFG1_ATPase
LRR_4
Motif
Other DBs
NCBI-GeneID:
122847054
NCBI-ProteinID:
XP_044000348
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Position
LG17:22463002..22485325
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AA seq
1077 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPEPEPSCVSFKSDWSKDKLI
DFKSPGSQTTERVDQQSSEVPSDPSVQQHQTELDSIFKLLEDNIVTFVKNELKNIQKVLS
SDDPQCSESQTEDEVLQSEEEEQRRSSRESVMKITLNFLRRMRQEELADHLQSKHLAGVC
QPQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEVRQIETASRK
PHRPETTIRQEDIFKVTPGRYQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNVQFI
FPFTFRELNVLKEKKFSLVELVHHFFTETKEICSFEHFQVLFIFDGLDESRLPLDFHNKE
ILTDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAASQIPPHCVGMVTEVRGFNDPQK
EEYFRKRFRDEEHPSRIISHIKTSRSLHIMCHIPVFCWITATVLEDVLETREGGELPRTL
TEMYIHFLVVQTKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFNQLQKGNLIFYESDL
TECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFINCGVNL
MKDDTPSFFSTFFNRSNIISLHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQRLLQGLL
TQTGSSSQTNQETVQYIKKKISENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLST
DKLSPAQWSALGFILVSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKALLSDCNLSER
SCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGC
ASLASALTSNPSHLKELDLSYNHPGDSGVKLLWAGLKDPHWRLEALRVEPAGVQFLTPGL
RKYSCQLTIDTNTVNRKLKLSEDNRKVTFVKELQSYPDHPDRFDNWNQLLCRTGLTGRCY
WEVEWRGYVYISVSYRRIRRKGGSRDCWLGCNDHSWSLFCSDDGYSVWHNDKQTPLSSSS
VSNRVSVYVDCPAGILSFYRVSSDSLILLHTFNTKFTEPLIPGFWFWSSSVSSVFLC
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
ccagaaccagaacccagctgtgtgtcctttaagagtgactggtcaaaggataaactcatt
gactttaaatctcctggatctcaaacaacagagagagttgaccagcagagctcagaggtt
cccagtgatccgtctgtccagcagcatcaaacagaactggactccatatttaagctgctg
gaggacaacattgtcacttttgtgaagaatgagctgaaaaacatccagaaggttctgagt
tcagatgatccacaatgctcagagagtcagacagaagatgaggtgttgcaaagtgaggaa
gaagagcagaggaggagcagcagagagtcagtgatgaagatcacactgaacttcctcagg
aggatgaggcaggaggagctggctgaccatctgcagagcaaacatcttgctggagtttgt
caacctcaacttaaatctggtctgaagaaaaagttccagtctgtgtttgaggggattgct
aaagcaggaagtccaacccttctgaaccagatctacacagagctctacatcacagaggga
gggactggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaa
ccacacagaccagaaacaacaatcagacaagaagacatctttaaagtcacacctggaaga
tatcaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtctta
acacagaagttcactctggactgggctgaagacaaagcccaccagaacgtccagttcata
tttccattcactttcagagagctgaatgtgttgaaagagaaaaagttcagtttggtggaa
cttgttcatcacttctttactgaaaccaaagaaatctgcagctttgaacacttccaggtt
ctgttcatctttgatggtttggatgagagtcgacttcctctggacttccacaacaaggag
atcctgactgatgctacagagtccacctcagtggatgttctgctgacaaacctcatcagg
gggaaactgcttccctctgctctcctctggataaccacacgacctgcagcagccagtcag
attcctcctcattgtgttggcatggtaacagaggtgagagggttcaatgacccacagaag
gaggagtatttcagaaagagattcagagatgaggagcatcccagcaggatcatctcccac
ataaagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcact
gctacagttctggaggatgtgttggagaccagagagggaggagagctgcccagaaccctg
actgagatgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtatgat
ggaggagctgaaacagatccacactggagtccagagagcaggaagatgattgagtctctg
ggaaaactggcgtttaatcagctgcagaaaggaaacctgatcttctatgaatcagacctg
acagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatc
tttaaagaggagagaggtctgtaccaggacaaggtgttctgcttcgtccatctgagtgtt
caggagtttctggctgctcttcatgttcatctcaccttcattaactgtggggtaaacctg
atgaaagatgatacaccatcatttttttctacattttttaacagatcaaatataatttct
ctccatcaaagagctgttgaccaggccttacagagtccaaatggacacctggacttgttc
ctccgcttcctcctgggactttcactgcagaccaatcagagactcctacaaggtctgctg
acacagacaggaagtagctcacagaccaatcaggaaacagttcaatacatcaagaagaag
atcagtgagaatgtgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactg
aatgatcgttctctagtggaggagatccaacagtctctgagttcaggaagtctctccaca
gataaactgtctcctgctcagtggtcagctctgggtttcatcttagtgtcatcaggaaaa
gatctggatgtgtttgacctgaagaaatactctgcttcagaggaggttcttctgaggctg
ctgccagtggttaaagcctccaacaaagctctactgagtgactgtaacctctcagagaga
agctgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggac
ctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactgaagagt
ccaaactgcaacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgt
gcttctctggcctcagctctgacctccaacccctcccatctgaaagagttggacctgagc
tacaatcatccaggagactcaggagtgaagctgctgtgggctggactgaaggatccacac
tggagactggaagctctcagggtggagcctgctggagtccaattcctgacaccaggtctg
aggaagtattcctgtcaactcaccatcgacacaaacacagtgaacagaaaactcaaactg
tctgaagacaacaggaaggtgacatttgtgaaggagcttcagtcatatcctgatcatcca
gacagatttgataactggaatcagctgctgtgtagaactggtctgactggtcgctgttac
tgggaggtcgagtggagaggatatgtttatatatcagtgagttacagaagaatcaggagg
aaaggaggaagtagagactgttggcttggatgtaatgatcattcctggagtctgttctgt
tctgatgatggttattctgtctggcataatgacaaacaaactcctctctcctcctcctct
gtctctaacagagtatcagtgtatgtggactgtcctgctggcattctgtccttctacaga
gtttcctctgactcactgatcctcctccacaccttcaacaccaaattcactgaacctctg
attcctggattttggttctggtccagttcagtttcctcagtgtttctgtgctga
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