Gambusia affinis (western mosquitofish): 122847056
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Entry
122847056 CDS
T07758
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122847056
Pattern recognition receptors [BR:
gaf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122847056
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
122847056
NCBI-ProteinID:
XP_044000351
LinkDB
All DBs
Position
LG17:22510413..22522809
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AA seq
1113 aa
AA seq
DB search
MDQCEDREEGVPPSKTTLCGEDESQSKGQRIHQRLKPEPEPSCVSFKSNRSKNAIFDFKS
PGCPPSERIHQRFTPEPKPSIVPFRSNRSKNNPIYFKSPGSPPSWRVDQQSSEIHRDLST
QQHQTQLDSIFMLLEKNIVSFVKNELKKIQKVLNPDYTECSESQKKDKVLEGEEEEQRRS
SREAVMKITMNFLRRMKHEKLADRLMNKHLATVCQHQLKSGLKKKFQSVFEGIAKAGSPT
LLNQIYTELYITEGGTGEVNDEHEVRQIETASRKSNRPETTIRQEDIFKVPPGRDQPMRT
LMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIQLIFPFMFRELNVLKEKKFSLVELVHHFF
TETKEICSFEHLQVLFIFDGLDESRLPLDFHNKEILTDATESTSVEVLLTNLIRGKLLPS
ALLWITTRPAAANQIPPQCVGMVTEVRGFNDPQKEEYFRKRIRDEDQASRIISHMKTSRS
LHIMCHIPVFCWITATVLEDVLKNRKGGELPRTLTEMYIHFLVVQTKVKKVKYDGGAETD
PHWTPESRKMIESLGKLAFDQLQKGNLIFYESDLIECGINIRAASVYSGVFTQIFKEERG
LYQDKVFCFVHLSVQEFLAALHVHLTFINSGVNLMKETQTSKKFPSINKPKLKSIHQRAV
DQALQSPNGHLDLFLRFLLGLSLQTNQRVLQGLLTQTQSSSHANQETVQYIKEKINKNVS
AEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDKLSPAQWSALGFILVSSGKDLDVFD
LKKYSASEEVLLRLLPVVKASNKALLSDCNLSERSCEALSSVLSSQSSSLRELDLSNNNL
QDSGVKLLSAGLKSPNCNLETLSLSGCLVSEEGCASLASALTSNPSHLKELDLSYNHPGD
SGVKLLWAGLKDPHWRLEALRVEPAGVRFLTPGPWRYSCQLTIDTNTVSRKLKLSEDNRK
VTCVEELQSYPDHPDRFDDWNQLLCRTGLTGRCYWEVEWRGEVDISVSYRRIRRKGNGED
CVFGWNDHSWSLNCSDVKGYSVWHNNIETRLSSSSVSNRVSVYVDCPAGILSFYRVSSDS
LILLHTFNTKFTEPLVPGFGFWRFSSGSSVFLC
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaagatgagagccagagcaaaggtcagaggatccatcagagactcaaaccagaaccagaa
cccagctgtgtgtcctttaagagcaacaggtcaaagaatgcaatctttgactttaaatct
cctggatgtccaccatcagagaggatccatcagagattcacaccagaaccaaaacccagc
attgtgcccttcaggagcaacaggtcaaagaataatcccatttactttaaatcgcctgga
tctccaccatcatggagagtggaccagcagagttcagagattcatagagatctgtctacc
cagcagcatcaaacacagctggactccatatttatgctgctggagaagaacattgtcagt
tttgtgaagaacgagttaaagaagatccagaaggttctgaatccagattacacagaatgc
tcagagagtcagaaaaaagataaggtgttggaaggtgaggaagaagaacagaggaggagc
agcagagaggcagtgatgaagatcacaatgaacttcctgaggaggatgaagcatgaaaag
ctggctgaccgactgatgaacaaacatcttgctacagtttgtcaacatcaacttaaatct
ggtctgaagaagaagttccagtctgtgtttgaggggattgctaaagcaggaagtccaacc
cttctgaaccagatctacacagagctctacatcacagagggagggactggagaggtcaat
gatgaacatgaggtcagacagattgaaacagcatccaggaaatcaaacagaccagaaaca
acaatcagacaagaagacatctttaaagttccacctggaagagatcaaccaatgagaaca
ctgatgacaaagggggtggctggcattgggaaaacagtcttaacacagaagttcactctg
gactgggctgaagacaaagcccaccagaacatccagttaatatttccattcatgttcaga
gagttgaatgtgttgaaagagaaaaagttcagtttggtggaacttgttcatcacttcttt
actgaaaccaaagaaatctgcagctttgaacacttgcaagttctgttcatatttgatggc
ttggatgagagtcgacttcctctggacttccacaacaaggagatcctgactgatgctaca
gagtccacctcagtggaggttctgctgacaaacctcatcagggggaaactgcttccttct
gctctcctctggataaccacacgacctgcagcagccaatcagatccctcctcagtgtgtt
ggcatggtgacagaggtcagagggttcaatgacccacagaaggaggagtacttcaggaag
agaatcagagatgaggaccaggccagcaggatcatctcccacatgaagacatcacgaagc
ctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggat
gtgttgaagaacagaaagggaggagagctgcccagaaccctgactgagatgtatatccac
ttcctggtggttcagaccaaagtgaagaaggtcaagtatgatggaggagctgaaacagat
ccacactggactccagagagcaggaagatgattgagtctctgggaaaactggcttttgat
cagctgcagaaaggaaacctgatcttctatgaatcagacctgatagagtgtggcatcaat
atcagagcagcctcagtgtactcaggagtgttcacacagatctttaaagaggagagaggt
ctgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagtttctggctgct
cttcatgttcatctgaccttcatcaactctggtgtcaacctgatgaaagaaacacaaacg
tctaagaaatttccatcaattaataaacctaaactaaagtctatccatcagagagctgtt
gatcaggccttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggt
ctttcactgcagaccaatcagagagtcctacaaggtctgctgacacaaacacaaagtagt
tcacacgccaatcaggaaacagttcagtacatcaaggagaagatcaataaaaatgtgtct
gcagagaaaagtatcaatctgttccactgtctgaatgaactgaatgatcgttctctagtg
gaggagatccaacagtctctgagttcaggaagtctctccacagataaactgtctcctgct
cagtggtcagctctgggtttcatcttagtgtcatcaggaaaagatctggatgtgtttgac
ctgaagaaatactctgcttcagaggaggttcttctgaggctgctgccagtggttaaagcc
tccaacaaagctctactgagtgactgtaacctctcagagagaagctgtgaagctctgtcc
tcagttctcagctcccagtcctccagtctcagagaactggacctgagtaacaacaacctg
caggattcaggagtgaagcttctctctgctggactgaagagtccaaactgcaacctggaa
actctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctggcctcagct
ctgacctccaacccctcccatctgaaagagttggacctgagctacaatcatccaggagac
tcaggagtgaagctgctgtgggctggactgaaggatccacactggagactggaagctctc
agggtggagcctgctggagtccgattcctgacaccaggtccatggagatattcctgtcaa
ctcaccatcgacacaaacacagtgagcagaaaactcaaactgtctgaagacaacaggaag
gtgacatgtgtagaggagcttcagtcatatcctgatcatccagacagatttgatgactgg
aatcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtcgagtggaga
ggagaagttgatatatcagtgagttacagaagaatcaggaggaaaggaaacggtgaagac
tgtgtgtttggatggaatgatcattcctggagtctgaactgctctgatgttaaaggttac
tctgtctggcacaataacatagaaactcgtctctcctcctcctctgtctctaacagagta
tcagtgtatgtggactgtcctgctggcattctgtccttctacagagtttcctctgactca
ctgatcctcctccacaccttcaacaccaaattcactgaacctctggttcctggattcggg
ttctggaggttcagttctggttcctcagtgtttctgtgctga
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