Gambusia affinis (western mosquitofish): 122847062
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Entry
122847062 CDS
T07758
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122847062
Pattern recognition receptors [BR:
gaf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122847062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
LRR_1
LRR_4
SPRY
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
122847062
NCBI-ProteinID:
XP_044000354
LinkDB
All DBs
Position
LG17:complement(22751203..22773187)
Genome browser
AA seq
1276 aa
AA seq
DB search
MKQRRRANQRRREEGVPPSKTTLCGEDESQSKGQRIHQRRKPEPEPKPSCVSFKSDISKR
YFIDFKSPGSPPSERIHQRRKPQPAPRCVSSKSNRSKNESINFKSPGSPPSERIHQRFKT
EPEPEPSCVSFKSDRSIDRPIVDFQSPGPPSSERVNQQSSEVPSGQSVKQHQTQLDSIFM
LLEDKIVTFVKKELMKILKILSPDYPEFSDTQRDDEELEGDEEEQRSSKEAVVKITLHFL
KKMNQEKLADCLQSRHFAAVCQHQLKSGLKKKFQSVFEGIAKAGRPTLLNQIYTELYITE
GGTGEVNDEHEVRQIETASRKPHRPETTIRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTV
LTQKFTLDWAEDKAHQNIHFIFPFTFRELNVVKEQKFSLVELVHHFFSESKEICSFEQLQ
VLFIFDGLDESRLPLDFHNKEILTDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAAN
QIPPQCVGMVTEVRGFNDPQKEEYFRKRFRDEEQASRIISHMKTSQSLHIMCHIPVFCWI
TATVLEDVLETREGGELPRNLTEMYIHFLVVQTKVKKVKYDGRAETDPHWSPESRTMIES
LGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFIHLS
VQEFLAALHVHLNFINSGCDIMKETQRSKKSSLLNKPDLKCLHQRAVDQALQSPNGHLDL
FLRFLLGLSLQTNQRLLQGLLTQTGSRSQTNQKTVQYIKKKVSENVSVEKSINLFHCLNE
LNDRSLVEEIQQSLSSGSLSTDKLSSTQWSALVFILMSSGKDLDVFDLKKYSASEEVLLR
LLPVVKGSNNSLLSDCNLSERSCEALSSVLSSQSSSLRKLDLSNNNLHDSGVKLLSAGLM
SPNCNLETLRLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSP
NCNLETLRLSGCNLSERSCEALSSVLSSQSTSLRELDLSNNNLQDSGVKLLSAGLKSPNC
NLETLSLSGCLVSEEGCASLASALTSNPSHLKELDLSYNHPGDSGVKLLWAGLKDPHWRL
EALRVEPAGVQFLTPGPWRYSCQLTIDTNTVNRKLKLSEDNRKVTYVKELQSYPDHPERF
DKWNQLLCRTGLTGRCYWEVEWRGEVNISVSYRRIRRKGISRDCLFGENDHSWSLRCSDV
DGYSVWHNNRGTRLSSSSVSNRVAVYADCPAGILSFYRVSSDSLILLHTFNATFTEPLIP
GFRFWWTSSVSSVFLC
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagagaagaagagccaatcagaggaggagagaggagggagtccctccctctaaa
accactctgtgtggggaagatgagagccagagcaaaggtcagaggatccatcagagacgc
aaaccagaaccagaaccaaaacccagctgtgtgtcctttaagagtgacatttcaaagcgt
tacttcattgactttaaatctcctggatctccaccatcagagaggatccatcagagacgc
aaaccacagccagcacctagatgtgtgtcctctaagagcaacaggtcaaagaatgaatct
attaactttaaatctcctggatctccaccatcagagaggatccatcagagattcaaaaca
gagccagaaccagaacccagctgtgtgtcctttaagagcgaccggtcaatagatcgtcct
attgttgactttcaatctcctggacctccatcatcagagagagtgaaccagcagagctca
gaggttccaagtggtcagtctgtcaaacagcatcaaacacagctggactccatatttatg
ctgctggaggacaaaattgtcacttttgtgaagaaagaactgatgaaaatccttaagatt
ctgagtccagattacccagaattctcagacactcagagagatgatgaggagttggaaggt
gatgaagaagaacagagaagcagcaaagaggcagtggtgaagatcacactgcacttcctg
aagaagatgaatcaggaaaagttggctgactgtttgcaaagcagacattttgctgcagtt
tgtcaacatcaacttaaatctggtctgaagaagaagttccagtctgtgtttgaggggatt
gctaaagcaggaagaccaacccttctgaaccagatctacacagagctctacatcacagag
ggagggactggagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccagg
aaaccacacagaccagaaacaacaatcagacaagaagacatctttaaagtcccacctgga
agagatcaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtt
ttaacacaaaagttcactctggactgggctgaagacaaagcccaccagaacatccacttc
atatttccattcacattcagagagttgaatgtggtgaaagagcaaaagttcagcttggtg
gaacttgttcatcatttctttagtgaaagcaaagaaatctgcagctttgaacagttgcag
gttctgttcatctttgatggtttggatgagagtcgacttcctctggacttccacaacaag
gagatcctgactgatgctacagagtccacctcagtggatgttctgctgacaaacctcatc
agggggaaactgcttccctctgctctcctctggataaccacacgacctgcagcagccaat
cagatccctcctcagtgtgttggcatggtaacagaggtcagagggtttaatgacccacag
aaggaggaatacttcaggaagagattcagagatgaggagcaggccagcaggatcatctcc
cacatgaagacatcacaaagcctccacatcatgtgccacatcccagtcttctgctggatc
accgctacagttctggaggatgtgttggagaccagagagggaggagagctgcctagaaat
ctgactgagatgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaagtat
gatggaagagctgaaacagatccacactggagtccagaaagcaggacgatgattgagtct
ctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagac
ctgacagagtgtggcatcgatatcagagcagcttcagtgtactcaggagtgttcacacag
atctttaaagaggagagaggtctgtaccaggacaaggtgttctgcttcatccatctgagt
gttcaggagtttttggctgctcttcatgttcatctgaactttatcaactctggttgtgac
ataatgaaagaaacacaaagatctaagaagtcttcattacttaataaacctgacctaaaa
tgtctccatcagagagctgttgatcaggccttacagagtccaaatggacacttggattta
ttcctccgcttcctcctgggactttcactgcagaccaatcagagacttctacaaggtctg
ctgacacagacaggaagtagatcacaaactaatcagaaaacagttcagtacatcaagaaa
aaagtcagtgaaaatgtgtctgtagagaaaagcatcaatctgttccactgtctgaatgaa
ctgaatgatcgttctctagtggaggagatccaacagtctctgagttcaggaagtctctcc
acagataaactgtcttctactcagtggtcagctctggttttcatcttaatgtcatcagga
aaagatctggatgtgtttgacctgaagaaatactctgcttcagaggaggttcttctgaga
ctgctaccagtggttaaaggctccaacaattctctactgagtgactgtaacctctcagag
agaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagaaaactg
gacctgagtaacaacaacctgcatgattcaggagtgaagcttctctctgctggactgatg
agtcccaactgcaacctggaaactctcagactgagtggctgtaacctctcagagagaagc
tgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaactggacctg
agtaacaacaacctgcaggattcaggagtgaagcttctctctgctgggctgaagagtcca
aactgcaacctggaaactctcagactgagtggctgtaacctctcagagagaagctgtgaa
gctctgtcctcagttctcagctcccagtccaccagtctcagagaactggacctgagtaac
aacaacctgcaggattcaggagtgaagcttctctctgctgggctgaagagtccaaactgc
aacctggaaactctcagcttatcaggctgtttggtctcagaggaaggctgtgcttctctg
gcctcagctctgacctccaatccctcccatctgaaagagttggatctgagctacaatcat
ccaggagactcaggagtgaagctgctgtgggctggactgaaggatccacactggagactg
gaagctctcagggtggagcctgctggagtccaattcttgacaccaggtccatggagatat
tcctgtcaactcaccatcgacacaaacacagtgaacagaaaactcaaactgtctgaagac
aacaggaaggtgacatatgtgaaggagcttcagtcatatcctgatcatccagaaagattt
gataaatggaatcagctgctgtgtagaactggtctgactggtcgctgttactgggaggtc
gagtggagaggagaagttaatatttcagtgagttacagaagaatcaggaggaaaggaatc
agtagagactgtttgtttggagagaatgatcattcctggagtctgagatgctctgatgtt
gatggttactctgtctggcacaataacagaggaactcgtctctcctcctcctctgtctct
aacagagtagcagtgtatgcggactgtcctgctggcattctgtccttctacagagtttcc
tctgactcactgatcctcctccacaccttcaacgccacattcactgaacctttgattcct
ggatttaggttctggtggaccagttctgtttcctcagtgtttctgtgctga
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integrated database retrieval system
