KEGG   Gambusia affinis (western mosquitofish): 122847076
Entry
122847076         CDS       T07758                                 
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    122847076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gaf04131]
    122847076
Membrane trafficking [BR:gaf04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    122847076
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML ASA1 CFAP251_N Beta-prop_VPS8 Beta-prop_WDR41 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_Aladin Beta-prop_IFT140_1st DSE1_N Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_WDR19_1st WDR90_beta-prop_4th WDR72_alpha-sol Beta-prop_TEP1_C Tricorn_2nd PH_SPO71 PD40 zf-MYND
Other DBs
NCBI-GeneID: 122847076
NCBI-ProteinID: XP_044000361
LinkDB
Position
LG17:complement(24530933..24597268)
AA seq 1525 aa
MSGNNLVLPIVLWGRTAPTHCISSLLVMDDFSTIITGCHDGQICLWDMTPELQICPRAML
FGHTASITCLSKASATSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFT
IGTQKEGRLLCNGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWMITAEVSKMQDLDPVFEEESKPIYCQGCQSISFCSFTQSSLLVVCSKYWRV
FDAGDYSLLCSVPSDSDQSWTGGEFISADKVIIWTEDGCSYIYKLPASCQSASEYFRSDV
GRTKEGSIPPLIYSIAERSDKQKDGGEQEEQEEQEVEVICLRPSGFAPELYTPLQLFQHR
PLEAPLLICPPVTRFFFGRREPFHKLLVQGDSAGRLSLWSVPDATQPQPSATPAELQMSS
TVSLQEAFDKLTPVSSGIIDQLSFLPNKQQPIKVTASVYIPSQGRLVCGREDGSIVLVPA
TQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCVLYPYQVSPRYDQRSLVSGGVDFSVI
VWDIFTGEMKHIFCVHGGEISQLIVPPENCSTRVQHCVCSVASDHSVGLLSLRERKCIML
ASRHLFPIQVIKWRPADDYLVVGCSDGSVYVWQMDTGALDRCVMGITAVEILNACDELAP
ATVDALSHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLAADNADKGNLPKYSHNALV
VQAMKTNLTDPDMHVLFFDVEALIIQLLTEEAQRPNPTLVSPETLQKSQAGADKGGSFLA
NKIFKQVKETMKETIKEHLLDEDEEEEEEMRRREEKSKSLSLLEYNLTMDTAKLFMSCLH
AWGLNEQLDGICLERLGMLRPHCPISFGLISRGGHMSLMLPTFKESLLHQLSLATGLKLT
LSDIVGKGTYGVSRAVTTQHLLSAISLSNTLMGMTNATFVGEHMKKAPIRPPRPGGTPES
PRRTPAAPPQPSNPALQAQIKQAASTAAAAAGAPGAPGGHPQGAPGSHNIPSVNEGWSQL
AAMHCVMLPDLLGLDKYRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIGQSGRKDTI
DAWALYLPQYVDTVSSPGAATETPPQAPPPPEAQPVETKAPEEEMDVTDDDITAGCLSNL
PPNAKKISNSYEERRKQATAIVLLGVIGAEFGAEIEPPKGSVRARAGGAVPEGFGPTSGG
SSNYSLARHTCKALTFLLLQPPSPKLPAHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGL
LELCADAEKQLANVSMGLPLNPPADSARSARHALSLIATARPPAFITTIAREVHRHNAAQ
ANSQSQQNVHTTTLARAKAEILRVIDILIEKMPGDVVDLLVEVMDIIMYCIEGSLVKKKG
LQECFPAICKFYMVGYCDRSHRIAVGARQGSVALYDVRTGKCQNIHGHKGPITAVSFAPD
GRYLATYSNADSHICFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSQNHLKL
ARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4578 nt   +upstreamnt  +downstreamnt
atgtcggggaacaacctggtcctgcccatcgtgctgtggggccgcacggcgcccactcac
tgcatcagcagcctgttggtgatggacgacttcagcaccatcatcaccggttgccatgac
ggtcagatctgcctgtgggacatgacgcccgagctgcagatctgtcccagagcgatgctg
tttggccacacggcctccatcacctgcctgtctaaagccagcgccaccagcgacaagcag
tacatcgtcagcgcctcagagagcggggagatgtgtctgtgggacgtaaacgacgggcgc
tgtatcgagttcaccaagctggcctgcgctcacactgggattcagttctaccagttcacc
atcggtacgcagaaggagggtcgcctgctgtgtaacggccattacccagagatccttgtg
gttgacgccaccagcctggaggttctctactctctggtctctaagatctctcctgattgg
atcagctccatgagcatcatccgctcccatcggacccaagaggacacggtggtggcagta
tcagtgacggggattttgaaggtgtggatgataacagctgaggtcagcaagatgcaggat
ctggacccggtctttgaggaagagtccaagcccatctactgccagggctgccagagcatc
tccttctgcagcttcacccagagcagcctgctggtggtctgctccaagtactggagggtg
ttcgatgcaggagattactctctgctctgctccgtgcccagcgacagcgaccagtcctgg
accggcggtgaattcatctctgcggataaagtcatcatctggactgaagacggctgcagc
tacatctacaagctgccggccagctgccagtccgccagcgaatatttccgcagcgacgtt
gggcgaaccaaagagggatcgatccccccgctgatctacagcatcgctgagcgctcagac
aaacagaaggacggaggtgagcaggaggagcaggaggagcaggaggtggaggtcatatgc
ctccgtcccagtggcttcgccccagagctctacaccccactgcagcttttccagcaccgg
cctctagaggcgcctctcctcatctgtcccccagtgacccggttcttcttcggccgccgg
gagccgttccacaagctgctggtccagggagactcggccggccggctgtcgctgtggagc
gtcccggacgccacgcagccgcagccgagcgcaacgccagcagagctgcagatgtcgtcc
accgtcagcctgcaggaggcgttcgataaactgacccccgtctcttctgggatcatcgac
cagctgagcttcctgcccaacaagcaacaacccatcaaggttacggccagcgtctacatc
ccgtctcagggccggctggtgtgcggccgggaggacggcagcatcgtcctggtccccgcc
acgcagacggccatcgtgcagctgctgcagggggagcacatgctgcggaggggctggccg
ccccaccggacgctgcggggtcaccggaacaaggtgacctgcgtcctctacccgtaccag
gtgtcgccgcgctacgaccagcgctccctggtgtccggaggagtcgacttctccgtcatc
gtctgggacattttcaccggagagatgaagcacatcttctgcgttcatggaggggaaatc
agccagctgatcgtcccgccggaaaactgcagcacccgcgtgcagcactgcgtttgctcc
gtggccagcgaccactccgtcggcctgctcagcctgcgggagaggaagtgcatcatgctg
gcgtcccgacacctcttccccatccaggtcatcaagtggcggccggccgacgactacctg
gtggtgggatgctccgacggctccgtctacgtctggcagatggatacaggagctctggat
cgctgcgtgatgggaatcacggcggtggagatcctgaacgcctgcgacgagctcgccccc
gccaccgttgacgccctgagccactctgcggtcaacctgaagcaggccatgacgcgccgc
agcctggcggcgctcaagaacatggcgcagcacaagctgcagacgctggcgaccaacctg
ctggccgctgacaacgccgacaaggggaatttgcccaaatactcccacaatgccctggtg
gtccaggcgatgaagaccaacctgacggacccagacatgcacgttctgttcttcgacgtg
gaggcgctgatcatccagcttctgacggaggaggctcagcggccgaacccgacgctggtt
tcccccgagacgctgcagaagagccaggcaggcgccgacaagggcggctccttcctggcc
aacaaaatcttcaaacaggtgaaagagacgatgaaggagacgatcaaggagcacctgctg
gacgaagacgaggaggaggaagaggagatgaggaggcgcgaggagaagtccaagtctctg
agtctgctggagtacaacctgaccatggacacggccaagctgttcatgtcctgcctgcac
gcctggggcctcaacgagcagctggacggcatctgcctggagcgactgggcatgctcaga
ccgcactgccccatctccttcggcctgatctccaggggcggacacatgtccctcatgctg
cccaccttcaaggagtctttgctgcaccagctgtccctggctaccggcctgaagctgact
ctgtccgacatcgtggggaaggggacgtacggcgtgtccagggctgtcaccacgcagcac
ctgctgtcggccatttctctgtccaacacgctgatgggaatgaccaacgccaccttcgta
ggcgagcacatgaagaaagccccgatcaggccccccagaccaggaggaaccccggagtct
cctcggaggacgcccgccgcccccccccagccctccaacccggcgctacaggcccagatc
aaacaagctgccagcactgctgctgccgctgctggggctccaggggcccctgggggccac
cctcagggggcccctggctctcataacatcccctcagtcaacgaaggatggagccagctg
gccgccatgcactgcgtgatgctgccggacctcctcggcctggacaagtacagaccgcct
ctgctggagatgctggcgagaagatggcaggaccgatgtctggaggtccgggaagcggcg
caggctctcctcctggccgagctgaggcggatcggacagtccggccggaaggacaccatc
gatgcctgggctctgtatctgccccagtatgtggacacggtcagctcccctggagcagca
acagagaccccgcctcaagccccgccccctccggaggctcagccagtggaaaccaaggct
ccagaggaggagatggacgtgaccgacgatgacatcacagcaggctgcctgtccaacctc
ccgccaaacgccaagaagatctccaactcgtacgaggagcggcggaagcaggccaccgcc
atcgtcctgctgggcgtcatcggagccgagttcggcgcagagatcgaaccgccaaaaggt
tcagtgcgcgctcgagctggaggagcggtgccggaaggcttcggaccgacgagcggcggc
tcgtccaactactcactggccagacacacctgcaaggcgctgaccttcctgctgctgcag
ccccccagccctaaactccccgcccacagcaccatccgccgcaccgccattgatctgatc
ggccgcggcttcaccgtctgggagccgtacatggacgtgtcagcggtgctcatggggctg
ctggagctgtgtgccgacgcagagaagcagctggctaacgtcagcatgggtctgcccctc
aacccccccgctgactcggcgcgctccgcccgccacgccctgtccctcatcgccaccgcc
cgcccgccggccttcatcaccaccatcgcccgcgaggtccaccggcacaacgcggcccag
gccaactcccagtcccagcagaacgtccacaccaccacgctggcccgggccaaggccgag
atcctccgggtcattgacatcctgatcgagaagatgcccggagacgtggtggacctgctg
gtggaggtgatggacatcatcatgtactgcatcgaaggctctctggtgaagaagaaagga
ctgcaggagtgtttccccgccatctgcaaattctacatggtcggttactgtgaccgcagc
catcgcatcgccgtcggagcgcgccaaggatcggtggcgctctacgacgttcgcacgggg
aaatgtcagaacatccacggccacaaaggtccgataacggccgtgtcgttcgcgcctgac
ggccgctacctggccacctactccaacgccgacagccacatctgcttctggcagatgaac
accagcctgctgggcagcatcgggatgctgaactcggctcctcagctgcgctgcatcaag
acgtaccaggttcctccggtccaacccgcctcgcccggctcccagaaccacctgaagctg
gcccgcctcatctggacctccaaccgcaacgtcatcctgatggcccacgacggcaaggag
catcgcttcatggtgtga

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