Gambusia affinis (western mosquitofish): 122847107
Help
Entry
122847107 CDS
T07758
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122847107 (pus1)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
122847107 (pus1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122847107 (pus1)
Prokaryotic type
122847107 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
122847107
NCBI-ProteinID:
XP_044000409
LinkDB
All DBs
Position
LG17:16135146..16138266
Genome browser
AA seq
417 aa
AA seq
DB search
MFKTRSLLSALVNYRQLLEKNGLKFLCTMSEEARDQETAKLLKRPNEVNEDSAERATKRI
KAEGEHNEDDKRYPKKKVVLLLAYSGKGYYGMQRNPGNSQFRTIEDDLVTALVKSGCIPG
NHGDDMRKMSFQRCARTDKGVSAAGQVVSLKLRLIEDIIEKINENLPPQIRVLGLKRVTQ
GFNSKNNCDARTYAYMLPTIAFSPKDYDTENIVAFRLEAETLQKVNQLFALYKGTHNFHN
FTSQKAPSDPSARRYITEMSCGEPFVRNNYEFAVITVRGQSFMLHQIRKMIGLVIAVIKG
YAKEEVMERSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHEQLEWDREEEAIKA
FKEAHIYPTIVETECEEGSMVSWMATLPIHDFEATVTVTQDNKDQKQENADEGNDSD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaacccgatcactgttaagtgccttagttaactacagacagttgttagagaaa
aacggtttaaagttcttgtgcacaatgagtgaagaagccagagatcaagagacagccaag
ctgttaaaaaggccaaatgaggtgaatgaggactcagctgagagagccactaagagaata
aaagcagaaggggagcacaatgaagatgacaagaggtacccaaagaagaaagtggtcctt
cttttggcatactctggaaagggatactatggcatgcagagaaatcctggaaactcccag
tttagaaccattgaagatgatctggtcactgctctagttaaatctggttgcattcctgga
aatcatggtgacgacatgaggaagatgtccttccaaagatgtgccagaactgacaagggt
gtttctgctgctggtcaagtggtttcactgaagcttcgtttaattgaggacataatagaa
aaaatcaatgagaatttaccaccacagatcagggtgcttgggctcaagcgagtgacccag
ggatttaactcaaaaaataactgtgatgcccgtacatatgcctacatgctcccaactata
gccttttctcctaaagactatgacactgagaacatagtggcgtttcgtctagaagcagag
actcttcagaaggtgaaccaactttttgccctctacaaagggacccataacttccacaat
ttcacctcccagaaggctccaagtgacccaagtgcccgccgctacatcacagagatgtcc
tgcggagagccttttgtccgcaacaactatgagttcgctgtgatcaccgtgcgaggccag
agctttatgctgcaccagattcgcaagatgatcggcttggtgatcgcagtgatcaaaggc
tacgccaaggaggaggtgatggagcgaagctggggtcaggagaaggtggacgtcccaaaa
gctccgggactcggtctggtactcgagagagttcactttgatcggtacaacaagcgcttt
ggaggggacggtctgcatgagcagctagaatgggatcgcgaggaggaggcgatcaaggcc
ttcaaagaggctcacatatatcctaccattgtcgagactgaatgtgaggagggttccatg
gtcagctggatggccactcttcccatccatgactttgaagcaacagttactgtaacacaa
gacaataaggaccaaaaacaggagaatgcagatgaagggaacgactctgattag
DBGET
integrated database retrieval system
