Gambusia affinis (western mosquitofish): 122847159
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Entry
122847159 CDS
T07758
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122847159 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122847159 (lamc3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Filo_VP35
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
122847159
NCBI-ProteinID:
XP_044000525
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All DBs
Position
LG17:7649074..7775764
Genome browser
AA seq
1642 aa
AA seq
DB search
MAATFALSSPILALVFSHFLHLYCPVWAAMDTCYDEKGASSLCMPKFENVAFNRTVVVSN
VCGSPPEDYCMQTGSTRSCHFCDASDPELNHNASLLTDFNRNEEPTWWQSQSMYYGIQYP
NSVNLTLHLGKAFEITYIRLKFHTSRPESFAIYKRTEKDGPWLPYQYYSASCGKTYRRNT
KGYIRPGEDERTAVCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLALQEWVTATDLL
ISLDRLNTFGDEFFKDPKVLRSYFYAISDFSVGGRCKCNGHASECVEGERGGLVCACQHH
TVGTDCQRCHPFYQDRPWARATGDSANECLKCNCSGRSDECVFDMEQYRRTASGGRCVSC
RDNTNGPHCEQCKENHYRKDPEEACLPCNCNINGSLSLQCNGEGRCRCRVGVTGQKCDTC
QTGFHSLGPGGCRPCDCEPSGSLDQCSPLDGHCYCKPNVEGQSCNRCKPGFFNMQREHPA
GCQPCFCFGHSFACYSSNHYRAIDITSDFIEDQDGWWGEFSGGLEYPLLWKEGDVYLLPL
NEEDTGFYRAPEKFLGYKVNSYGQLLSVTFTSETSELLPDRVTLLLQGSGTVLSADLSYQ
PLPDVDLSLTPRRSFSVRLHEYEARFRPQLSAFEFQRLLHNLTALKISNAGGHNYTSQLA
GVTLTSASSFSSPASAPAPWVEACSCPRGFAGEFCERCAPGFTREDPGRGPFSTCVLCSC
HQHGTCHPETGVCECLDFTGGTTCERCLDGYYGNALIGTPGDCQACPCPGLSSCAQIAET
GQVVCTNCPAGQTGVRCQICEDGYYGDPLGTSGTIRPCTRCTCNGNVDFNAVGVCDHFTG
RCLKCLGHTEGDQCQRCKQGFYGDALNQAARQKCRPCRCNAAGTSGPVDECHPMTGNCRC
LAHVIRRDCSHCEVGFFNLQPGIGCERCKCNPVGSLSMACHPITGECVCRAGVEGTLCGS
CRVGFFGFSSQGCRACNCDPMGSASMQCHGNGTCQCRRGFVGHKCDKCEMNYFYDRATHQ
CEECPVCYGLVKKYAENLQTRLQDLDKLLAHFDCRGRFGKRHHPLKYAMTGLYEGEHQRE
DTFPNALEDFLAFQEAREAFIKQFSLLEASAGALSAQLHGITFALNCSISMTEEEDEDEG
KDGRKDEESTGACRTFTKILLLIRASRDQLKQATLDLDNVVISFEAMSAPNKWNIMVNDS
QVLMKSHRETADHVEAIANRAVRESKQAFSFLMDLLQDNSTEEYTRNLKEQITRMQQQKE
NLTALLNATVAEHLALVEEDASFKLALGNITSSLHQLTLMDAGAASDTNQTEFNQTHPDN
STAQLSEDILKQTEELDQEIQTKENLISNISKEMESVKQTVLKNLEEVDAIKMLQGNVQE
AKASALTSVVFGKEVESDVITIHREVENMVKEWPRRQAQTKTALKKQRPQEEKVLSEVRK
KVKQIEKMLDPARENASLTRNITKEAEQMAHDVAKGSKAILTQAKHTRTAASQLNSQIDS
ALNKLSEQELLTEKAKSMIPTEPEVSLSSIKNDMEAAKLQLEEYSVTLSELISKIDGSVP
LERFHRILNETERRLSMLRGSVESPALGSKIQKLHSAAKEQQSRLSLIEQDIQEIREERE
SLRDIASNLPQSCPQALGEGNA
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacttttgctttgagttctcctatattggctcttgtcttttctcatttcctg
cacctctactgtccggtttgggccgcaatggacacctgctatgatgagaagggggcctca
agcctttgcatgcccaaatttgagaatgttgccttcaatcgcactgtggtggtgtcaaac
gtgtgtggttctccacctgaggactactgcatgcagacgggctcaacgcgctcgtgtcac
ttctgtgatgcatcagaccctgagctgaaccacaacgccagcctcctgacagactttaac
aggaatgaggagcccacatggtggcaaagccagtccatgtactatggcatccagtacccc
aattctgtcaaccttacccttcaccttggcaaagcctttgagataacatacatccgttta
aagtttcacaccagccggccggagagctttgccatatacaagcgtacagaaaaggatgga
ccttggttaccataccagtattacagtgcttcatgtgggaagacgtataggaggaacaca
aaaggttacattcgccctggagaagatgaaaggactgcagtatgtacggacgagttcagt
gatatctcccctctcactggaggaaatgtggctttttctaccctggaaggtcggcccagt
gcctacaactttgaccaaagcctggcattgcaggaatgggtgacagccactgacctgctc
atctctttggacaggctgaatacctttggggacgagttttttaaggatcccaaagtgctg
cgctcatatttttatgccatctctgatttttctgtgggtgggagatgcaagtgcaacggc
catgccagtgagtgtgttgagggggaacggggtggcctggtgtgcgcctgccaacatcac
acagtgggaaccgactgccagagatgtcaccccttttaccaggacagaccttgggccagg
gccactggggattccgccaacgagtgtttgaagtgtaactgcagtgggagatcagacgag
tgcgtgtttgacatggagcagtacaggcgcactgccagcggggggcgctgtgtgagctgc
agagacaacactaatggtccccactgcgaacaatgcaaggaaaatcactacaggaaggat
ccggaagaggcgtgcctgccctgcaactgcaatatcaatggctcattaagtttgcagtgt
aatggagaaggaaggtgtcggtgtcgagttggcgtgacaggacagaagtgcgacacgtgt
cagactggcttccactcactgggtccaggcggctgcaggccgtgtgactgcgagcccagc
gggagtttggatcagtgctcccccctggatgggcattgctactgtaagccaaacgtggag
gggcagagctgtaatagatgcaagccgggatttttcaacatgcaaagagagcacccagca
gggtgccagccatgtttctgttttggtcactcattcgcttgctactcgtccaatcactac
agagccattgacatcacctcagacttcattgaagatcaggatggttggtggggagagttc
tccggaggcctggagtaccccctgctgtggaaggaaggtgacgtctacctgctgcctctt
aatgaggaagacactggtttctacagagcccccgagaaattcctgggttacaaagtcaac
agctacggccagctcctctccgtcaccttcacctctgaaacctctgagctgctccctgac
cgggtcacactgctgctccaaggatctggaaccgtcctgtcagcagacctttcctaccag
ccactgccagatgtcgacctcagcctcaccccacggcgctccttcagtgtcaggctccat
gaatatgaggcgaggttcaggcctcagctgtctgcctttgagttccagcgcctccttcac
aacttgacggctctgaaaatcagcaatgctgggggacacaactacacatcacagcttgcg
ggggtaaccctgacctccgcttccagcttctccagtccagccagtgctcccgctccgtgg
gtggaagcttgctcatgtcctcgaggttttgcgggcgagttttgcgagcggtgcgccccg
ggattcaccagagaagacccgggcagagggcctttttcgacatgcgtgttgtgcagctgc
caccagcatggaacatgtcatccagaaacaggggtgtgcgagtgcttggatttcaccggc
gggacgacctgtgagcgctgcctggatggttactatggcaacgctttgattggcactcct
ggtgattgtcaggcctgcccttgcccgggcctcagcagctgcgcccagattgcagagacc
ggacaggtggtctgcaccaactgccctgcaggacagacaggcgtgcgctgtcagatttgt
gaagatggctactacggcgaccccctgggaacgtcggggacgattcgcccctgcacaagg
tgcacctgcaacggaaatgtggatttcaacgccgtgggagtctgtgaccactttaccggg
cgatgcctgaagtgcctcgggcacacagagggcgaccagtgccagcgctgtaagcagggc
ttttatggtgacgccctgaaccaagcggccagacagaaatgcagaccatgtcgctgcaac
gctgcgggaacctccgggcctgttgacgaatgccaccccatgacaggaaattgccgttgc
ctcgctcatgtgatcaggcgagactgcagccactgtgaagtcggcttcttcaaccttcag
cctggcattggatgcgaaaggtgtaaatgtaacccagtcggctcgctgtcgatggcctgc
catccaatcacaggggagtgcgtgtgtcgcgcaggggtggaggggaccctgtgtggctcc
tgccgtgtgggcttttttggattctcctcacaaggctgcagagcctgtaactgtgacccg
atgggctccgcttcaatgcagtgtcacggcaacggcacctgccagtgccgccggggcttc
gtgggtcacaagtgcgacaaatgtgagatgaattatttctatgaccgagccactcaccag
tgtgaggagtgtccagtttgctacggcctcgtcaaaaagtatgctgaaaatcttcagact
cgccttcaggacttggacaagctcctggctcactttgattgccgaggtagatttgggaag
cgccaccacccactgaagtacgccatgacggggctttatgaaggggagcaccagagggaa
gatacttttcccaatgcactggaggattttctggccttccaagaggcacgggaggccttc
ataaaacaattttccttgctggaagcttcagcgggcgcactttcagctcagctccacggc
attacatttgctttgaactgcagcatcagcatgacggaggaggaagacgaggacgagggg
aaggatgggaggaaggatgaggaaagtacaggagcgtgtcgaaccttcaccaaaatcctg
ctcctgatcagggcatccagggatcagctgaagcaggcaacgctggatctggacaatgtg
gtcatttcttttgaggccatgtcggcgcccaacaaatggaacataatggtcaatgactcc
caggtcctaatgaaaagtcacagagaaacggcggaccacgttgaggccatagccaacagg
gcggtgcgtgagtcaaagcaggctttcagcttcctgatggatctactgcaggacaactcc
acagaggagtacaccaggaatctgaaagagcaaataacccgaatgcagcagcagaaggaa
aacctgactgcgctgctaaatgctactgtagctgaacatctggccctggtggaagaagat
gcctctttcaagcttgccctgggtaacatcacatcatccttacatcagctgactctgatg
gatgccggagcagcatcagacacaaaccaaacagagttcaaccaaacacatccggacaac
tccactgcacagttgagtgaggatattttaaaacagacagaagagctggaccaagaaatt
cagaccaaagaaaatctcatcagtaacatcagcaaggagatggagtcagtaaaacagaca
gtcttgaaaaacctggaagaagtagacgcaataaaaatgctgcaagggaatgttcaggag
gcaaaagcttctgctttgacatcagtggtgttcggcaaagaagtggagtcagacgtcatc
accatccatagagaagtagaaaacatggtgaaagagtggccgcgccggcaggctcagacc
aagacggcgttaaagaagcaaagaccccaggaagaaaaggttctttcggaggtcaggaag
aaggtcaagcaaattgagaagatgctagatcctgcgagggaaaatgccagcctcacaagg
aacatcacaaaggaggcagagcaaatggcacacgatgtggctaagggatccaaagccatt
ctgacccaagccaagcataccaggacagcagcttctcagcttaactcacaaatagactct
gctttaaataagttatcagaacaagaattgctaacagagaaagcaaaatccatgatccca
acagagcctgaagtgtcactttccagcataaagaacgacatggaagcagctaaactccag
ttagaggaatattctgttactctaagtgaactaatcagcaaaatagacgggagcgtgcct
ctggagcgctttcatcgaatcctaaacgaaacagagcgccgtctgagcatgctgcgtggg
agtgtggagagcccggcgctgggctccaagatccagaagctgcactctgctgctaaagag
cagcagagccgcctgtccctcattgagcaggacatccaggagataagggaggagagagag
agtctcagggacattgcctccaacctgcctcagtcctgcccccaggccttgggagaaggt
aacgcctag
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integrated database retrieval system
