Glaciecola sp. 4H-3-7+YE-5: Glaag_0015
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Entry
Glaag_0015 CDS
T01483
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag03030
DNA replication
gag03410
Base excision repair
gag03420
Nucleotide excision repair
gag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Glaag_0015
03410 Base excision repair
Glaag_0015
03420 Nucleotide excision repair
Glaag_0015
03440 Homologous recombination
Glaag_0015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gag03032
]
Glaag_0015
03400 DNA repair and recombination proteins [BR:
gag03400
]
Glaag_0015
Enzymes [BR:
gag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Glaag_0015
DNA replication proteins [BR:
gag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Glaag_0015
DNA repair and recombination proteins [BR:
gag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Glaag_0015
NER (nucleotide excision repair)
GGR (global genome repair) factors
Glaag_0015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
DUF561
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEE20984
LinkDB
All DBs
Position
complement(16231..19017)
Genome browser
AA seq
928 aa
AA seq
DB search
MSNSDPATTPVIPNNPFILVDGSSYLFRAFHGMPPLTNSKGQDTGAVYGVINMLRSLIKQ
FNPTHMAVVFDAKGKTFRDEIYTEYKANRPSMPEELRSQIAPLHKIIQAMGLPIIVESGV
EADDVIGTLADQASKLGIPTLISTGDKDMAQLVNEHVTLINTMNNQIMDPQGVVEKFGIP
PELVIDFLALKGDKVDNIPGVPGVGDKSAVGLLQGIGSINEIYQNLDKIATLDFRGAKKM
ADKMREYEEQARLSYTLATIKLDVEMDCSPTSLSPTEANYSELRDLFAELEFKRWLKEAT
DALSGNDQLSQADQSNDEPAQNTDIKANYHTILTQDALDDWLKKLHNAALFAFDTETTSL
NYMQAELVGMSFCIEEGEAAYLPLAHDYADAPEQLDRDSVLALFKPLLEDKNKAKVGQHL
KYDKNVLANYDINLQGIAYDTMLESYVLDSVATRHDMDSLAQHYLGLSTVHFEDIAGKGA
KQLTFNQIPLEQAAHYAAEDADITLRLHNHIWKKLNQSPELASVLSEIEVPLATVLAKME
QFGVLIDSQKLGQQSQDLASRILQLENEVHILAGEEFNLGSTKQLQEILFKKLDLPVLKK
TPKGAPSTSEEVLQELALTYPLPKLLMEFRVLSKLKNTYTDKLPKMINQRSGRVHTSYHQ
AITATGRLSSTEPNLQNIPIRTEQGRRVRQAFIPRPGYKIVAADYSQIELRIMAHLSQDK
GLLKAFSQGKDIHTATAAEVFNVSLEEVTTEQRRNAKAINFGLIYGMSAFGLSKQLNVSR
QDAQHYMDLYFERYPGVLKYMEDARVVAKEKGYVSTVFGRRLYLPDINASNGLRRKGAER
AAINAPMQGTAADIIKKAMLKVDAWIDTLPNDQTRMIMQVHDELIFEIKEQNVESDKNTI
VDLMEKAVSLDVPLIVEAGVGENWDEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactctgatcccgctactacgcccgtcattcctaataacccatttatattagtt
gatggatcttcttatttgtttagggcttttcacggcatgccccctttaactaactctaaa
ggacaggacactggcgcagtctatggtgtgataaacatgctgcgtagcctgatcaaacaa
tttaaccccacacatatggctgttgtctttgatgccaaaggcaaaacttttcgggacgag
atctatacagaatataaagcgaaccgcccttcaatgcctgaagagctgcgcagtcaaatt
gcccctttgcataagatcattcaggcgatgggcttgcccattattgtagaatctggggtt
gaagccgatgatgtgatcggcaccttagccgatcaggcgagtaaacttgggatccctacc
cttatcagcacaggagacaaggacatggctcaactagttaatgagcatgtcacactcatt
aacaccatgaataaccaaataatggatccccaaggtgttgtggaaaaatttggtattccc
cctgagttagttatcgattttctggcgctcaaaggtgacaaagtcgataacattccagga
gttcctggcgttggcgataaaagcgcagtaggtctactgcaagggattggtagcatcaac
gagatttaccaaaacctcgacaaaatagccacgttggactttcgcggagccaagaagatg
gctgataagatgcgagagtatgaagaacaggctcgtctttcatacacattagcaaccatc
aaacttgatgttgaaatggattgcagcccaaccagtctttcaccaacagaggctaactat
agtgaactacgagatctattcgctgagctggagtttaaacgttggctgaaagaagcaact
gacgcactaagtggaaacgatcaactaagccaagcagatcaaagtaacgacgagccagca
caaaatacagatataaaagccaattatcacactatcttgacgcaagacgctctagacgat
tggttgaaaaaattacataacgcagcgcttttcgcttttgataccgaaacgaccagctta
aattatatgcaggcagagctcgtcggtatgtcattttgtatagaagaaggtgaagccgct
tacctccccctagcccacgattacgcagatgcgccagagcaattagatcgtgacagcgta
ttggccttattcaagcctttgttagaagacaagaataaagctaaggtcggacaacaccta
aaatacgataaaaatgtattagcgaattacgatatcaatcttcaaggtatcgcttacgat
acgatgctcgaatcatatgtgcttgatagcgtcgcaacccgacatgatatggatagctta
gcccagcattacttaggtctatcgaccgttcattttgaagatattgccggcaagggtgca
aaacaactaacgtttaatcaaattccgttagaacaagccgcacattacgctgctgaagat
gcagatatcacactaaggctgcacaatcatatttggaaaaagctaaatcaatcaccggaa
ctagcatctgtgttaagcgaaattgaagtgcctttagcaacggtactggctaaaatggag
cagtttggcgtgttaatagatagccagaaactcggtcaacaaagtcaggatcttgcctca
cggatccttcagctcgaaaacgaagttcatattttagcaggtgaagagtttaatctaggt
tcgactaaacaattacaagaaatactgtttaagaagttagacctacccgttttgaagaag
acaccaaaaggggctccatccacgtcagaagaggtactgcaagagttagcacttacatac
ccactacctaagctactgatggagtttagggtcttaagtaaattaaaaaacacatatacg
gataagctacctaagatgataaaccaacgcagtggacgcgttcatacctcatatcatcaa
gctattaccgcgacaggaagactatcgtctactgaacctaacttgcaaaatatcccgatt
agaacagagcaaggtcgcagagtacgacaagcgtttattcctcgaccaggctacaagatc
gtagcggcagattattctcaaattgaattgcggatcatggctcatctttcccaagataaa
gggttattaaaggcgttttctcagggtaaagacattcacaccgctaccgctgctgaagta
tttaacgtttccttggaagaggtgacaacagagcaaagacgcaacgccaaagccattaat
tttggtttaatttatggcatgtcagcattcggactatcgaaacagctaaatgtgtcacgc
caggatgcgcagcattatatggatctttactttgaacgttacccgggcgtacttaaatac
atggaagacgcacgtgttgtcgccaaagaaaaaggctacgtatcaaccgtatttggtcgt
cgtctttatttgcccgatattaatgctagcaatgggttacgacgcaaaggcgctgagcgg
gctgcaattaatgccccaatgcaaggtacagcagcagatatcatcaaaaaagcgatgtta
aaagttgatgcctggattgataccttgcccaatgatcaaaccagaatgattatgcaggtt
cacgatgaacttatttttgaaataaaagaacaaaatgtcgaaagcgacaaaaatactatc
gttgacctgatggaaaaagcagtttccttagatgtaccactgatagttgaagctggtgta
ggtgaaaattgggacgaagcccactaa
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