Glaciecola sp. 4H-3-7+YE-5: Glaag_0648
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Entry
Glaag_0648 CDS
T01483
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gag03019
]
Glaag_0648
Messenger RNA biogenesis [BR:
gag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Glaag_0648
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_16
AAA_22
AAA_28
SKI
AAA_33
ABC_tran
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
AEE21611
LinkDB
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Position
735061..735906
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AA seq
281 aa
AA seq
DB search
MKLIIISGRSGSGKSIVLRSLEDLGYYCVDNIPVNLLPTLTHTVADEYDQVAVSIDVRNL
PKDPNELVEILDYLPATWEMTILYLDASDDVLIKRFSETRRLHPLSKQNKSLAGAIQAES
QLLAPIAERADLYIDTDQLSIHQLAELVRERILGKKSSRLVLVFESFGFKHGIPKDADYV
FDARFLPNPHWEPDLKPLTGLDSPVEIFLGSQPIVTKFIWQIQNLISTWLPHLERNNRSY
VTIAIGCTGGQHRSVYVVEMLAKTFSTSHPDVQIRHRELNR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttatcatcataagtggccgctccggttcagggaagtccattgttttaaggtca
ttggaagatttaggctattactgtgttgataatatcccagttaacttattacccacattg
acccataccgtagcagatgagtacgatcaggtagccgtcagtattgacgtgcgtaactta
cctaaagatccgaatgagttggttgaaatactcgactacctgccagccacatgggaaatg
accatcctatacttagatgccagcgatgacgtactcattaagcgtttcagcgaaacacgc
cgcttgcatccattatccaagcaaaacaaatctttggctggggctattcaagcggagagt
cagttattagctccgatagcagaacgcgctgatttgtacatagatacggatcagttatcg
attcatcagttagctgagttggtacgtgaacgcattttgggcaaaaaaagctctcgtctg
gttttggtttttgaaagctttggttttaaacacggtattccaaaagatgcagattatgtg
tttgacgctcgctttttacccaacccccactgggagcccgatttaaaaccgcttacgggg
cttgattcacccgtagaaatatttttaggctcacaaccgatagtgactaaatttatttgg
caaattcagaatttgatttcgacctggctgccacatttagagcgcaacaaccgtagctat
gtaacgattgccataggttgtacaggtgggcaacaccgttctgtgtacgtggttgagatg
ctagcgaaaaccttcagtacctctcatccagatgtgcaaatacgtcatagagagttaaac
cgatga
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