Glaciecola sp. 4H-3-7+YE-5: Glaag_0659
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Entry
Glaag_0659 CDS
T01483
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gag03009
]
Glaag_0659
Enzymes [BR:
gag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Glaag_0659
Ribosome biogenesis [BR:
gag03009
]
Prokaryotic type
rRNA helicases
Glaag_0659
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
PRAI
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AEE21622
LinkDB
All DBs
Position
744328..745707
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AA seq
459 aa
AA seq
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MSKEFSSLGLEPALLDNLQSMGFSQMTDIQADTLPAILSGRDVVAKAKTGSGKTAAFGLA
LLHNLDVKRFRVQALVMCPTRELAEQVALEIRRLGRAIHNIKVLTLCGGTPMGPQIGSLE
HGAHIIVGTPGRIMDHLYKRRLDLSEVNTLVLDEADRMLDMGFEDEMDAVIKSVPAQRQT
LLFSATYPESIAAISGQVQKDPLEVTVESTHDTDSIQQVFFEVDDAHRTKATAALLSHYQ
PESAIVFCNTKIACQEVADSLQSLGVSVLALHGDLEQRERNQVLVRFANKSVSVLVATDV
ASRGLDIKEVNAVISYHITPDPEVHIHRIGRTGRAESKGVALTLVAPDEVARANAIEDYQ
KAKLKWTGIQAMRFHVNRLVQPQYATLCVDGGKKAKLRPGDLLGALTKQAEIPGDDIGKI
HITEFHAYVAVKTRSVKRAMRQLGEGKIKGKKFKVRKFN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaggaattttcttccctggggcttgagccagccttgctagataatttgcaaagt
atgggtttcagtcaaatgactgatattcaagctgatacattgcctgccatattgtctggg
cgagacgtagtagcgaaagcgaaaaccggtagtggtaaaactgcggcatttggattggcg
ctgttacacaatttagatgtaaagcgttttcgcgttcaggccctcgtgatgtgcccaaca
agagaattggccgagcaagttgctctagagatccgtcgtttagggcgggctattcacaac
attaaagttttgaccttatgtggtggcacacccatgggcccacaaattggctcgctagaa
catggtgcccacatcatagtgggaacgcctggtcgaataatggatcatctttataaacgc
cgattggacctatctgaagtcaatactttggtgctggatgaagcggatcgcatgctcgat
atggggttcgaagatgaaatggatgccgttattaaaagcgtgcctgcacagcgtcaaacg
ttacttttttctgctacttatccggaatcgatagcagcgataagtggtcaagtgcaaaaa
gatcccttagaagtgactgtcgagtcaacccatgacacagattcgattcaacaagtattt
tttgaagtagacgatgcgcatcgaaccaaggcaacagctgctcttttaagtcattatcag
cctgaatccgcgattgttttttgcaatactaaaatcgcgtgtcaggaagtggctgatagt
ttgcaatcactaggtgtgtcagtgctggctttgcatggtgacttagagcagcgtgagcgt
aaccaggtgttggtgcgctttgccaataaaagtgtatcggtattggtggccaccgatgtt
gcttctcgcggactagatataaaagaagtcaatgcggtgatcagttatcacatcacgcct
gaccctgaggtgcacatccatcgaattggtagaactggacgagcggaatctaaaggggtt
gcactgacgctggtagcgcctgatgaagtggctagagccaatgcaatcgaagactatcaa
aaagctaaattgaagtggactggcattcaggccatgcgttttcatgtgaatcgtcttgtt
caacctcagtatgcgaccttatgtgttgatggtgggaaaaaagcgaaattgcgacctggc
gacctccttggggcattgactaagcaagcagaaatcccgggtgatgatatagggaaaata
catattactgagtttcatgcttatgtagcggtcaaaacgcgcagcgtgaagcgcgccatg
cgtcagttaggcgaagggaaaattaaaggtaagaagttcaaagtacgtaaatttaactag
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