Glaciecola sp. 4H-3-7+YE-5: Glaag_0890
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Entry
Glaag_0890 CDS
T01483
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gag03000
]
Glaag_0890
Transcription factors [BR:
gag03000
]
Prokaryotic type
Helix-turn-helix
Other families
Glaag_0890
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_2
GAF_2
AAA_5
HTH_8
Mg_chelatase
AAA
GAF_3
HTH_50
AAA_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEE21853
LinkDB
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Position
complement(1043074..1044663)
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AA seq
529 aa
AA seq
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MPELNSTLLLEVALDLANSITNEDRFDRLLSSIRKAINCEAVVLLVNRGEQLTPLATQGL
APDTLGRRFKLSDHPRLALICAATQPVRFPSDSPLADPYDGLLLAKDGDLPVHSCMGLPL
YSDNKLIGVVTLDSLRPNAFNDISDRTLQLISALSAATLKTAIQLKALEQRAQQAQDLLQ
ELTHEALTRDGGELIGNSPSMQALKSEIQLVASSDYTVLVLGETGVGKELVARTLHRCSE
RSNHPLIHLNCASIPETLAESELFGHAKGAFSGAEKERPGKFQLADGGTIFLDEVGELPL
SVQGKLLRVLQSGEIQPVGKDQVSMVNVRVIAATNRDLAEEVKVGRFRADLYHRLSVYPV
RIPSLKERNNDILLLAGYFLEVTARKLGVRQLKIRPDVENALLEYTWPGNVRELEHVISR
ASLKATRHAQQQDIISISLADLDFETGLAQPPQLKPKEALVTHLKEQIPLKSLTEDFQRQ
YISDALVVHHGNWTNAAKQLGMDRANLARLAKRLGVSLEKHIKQQTRFL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctcaactcaaccctgttattagaagtggcgctagatcttgccaatagcatt
accaacgaagatcgttttgacagattgctgtcctctattcgaaaggcgattaactgtgag
gcggtggtattattagtgaatcggggcgaacagctgacgcccttagccacccaagggtta
gcccctgatacactagggcgacgttttaagctcagtgatcaccctcgcttggcgctaata
tgcgcagcaactcagcctgtgcgatttccctctgactccccgttggcagatccctacgat
ggcttactactagcaaaagacggagatttacctgtgcattcatgtatggggttacctttg
tatagcgataataagctgataggagtggtaaccctagatagcttaagaccgaacgcattc
aatgatatttcagatcgaaccttgcagctgatctcagccctgtcggcagccactttaaaa
acagctatacagttaaaagcgttagaacaaagagcacagcaagcacaggatttacttcaa
gagttaacccatgaagcactaacacgagacgggggagagctcataggcaatagcccaagc
atgcaggctttgaaaagtgaaattcagttagtcgctagttcagattataccgtgctcgtt
ttaggtgaaaccggtgtggggaaagagttagtcgcaagaactttgcaccgctgctctgag
cgcagtaaccatcctctgattcacttaaactgtgcatcaatccctgaaacattggctgaa
agcgaattatttggccatgcaaaaggagcatttagtggtgctgaaaaagaacggccaggg
aaatttcaattagccgatggaggaacgatcttcttagatgaagtaggtgaactgccattg
agtgtgcaaggtaagctattgcgtgtgctacaaagcggtgaaatacagcctgtgggcaaa
gatcaggtgtctatggtcaacgtgcgggtaatcgctgcgactaaccgagatcttgctgaa
gaggtaaaagtcggtcgttttcgagccgatctttaccaccgtctttcggtttatcctgtt
cgtattcctagcttaaaagaacgcaataacgacatactattacttgcaggttactttcta
gaagtcaccgctcgcaaactcggggtgcgccaactaaaaattcgccctgatgttgaaaat
gccctactggaatatacatggccaggcaacgtgcgcgagcttgagcatgtgattagccgc
gcatcactaaaagcaacacgtcatgcacaacaacaagatattatttcgatttcattagcc
gatttagactttgaaactggtttagcgcagcccccacaattaaagcccaaagaggcatta
gtaacgcaccttaaggagcaaatccccttaaaatccctgactgaagattttcagcggcaa
tatatttcagacgcccttgtcgtgcaccacggaaattggaccaacgcggcaaaacagtta
ggaatggaccgagctaacttagcccgtttagcgaaaagactaggtgttagtttagaaaaa
cacattaaacagcaaacgcgcttcttgtaa
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