Glaciecola sp. 4H-3-7+YE-5: Glaag_0911
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Entry
Glaag_0911 CDS
T01483
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gag03400
]
Glaag_0911
DNA repair and recombination proteins [BR:
gag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Glaag_0911
Archaeal homologous recombinant proteins
Glaag_0911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AEE21873
LinkDB
All DBs
Position
complement(1070053..1071426)
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AA seq
457 aa
AA seq
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MNILHTSDWHLGQNFFTKSRKDEHQAFLNWLLNVIHAREIDAVIVAGDIFDTGTPPSYAR
QMYNQFVVELSKLTCTLVVLGGNHDSVSTLNESKQLLACLNTHVIANTSGDIDQQVIELN
DETGQVGAILCAIPFIRPRDVLQSRSGESSEDKKLALSDAIKAHYATIYQHALTRREKHK
NSVNKHIPIIATGHLTALGVSQSESVREIYIGTLDGFAADGFPPADYIALGHIHRPQKVA
KSDHIRYSGSPIPLSFDELKSQKQVVLVEFDKQGQRSITPLDIPLFQPMAMLKGDLDSIK
AQLAHYPAAGDETSDTASTADDVFDQAPSEGQGDEKDAGQGEAQREVEGKDPATDKPTWL
CIHVDVQDYLSDLQQSIQTLTEGRNVEVLQLRRTRTRASQGLNQINNETLAELTPFEVFE
KRLELENFEGQEAQQRLTQIRQTFSEIVEEVRHKEAK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atcaacattctacacacctctgattggcacctagggcaaaacttttttacgaaaagtcgc
aaagacgagcaccaagcctttttaaactggctacttaacgtcatacacgcccgggaaata
gatgctgttatcgtcgctggggatatttttgatactggtacgcccccaagctatgcgcgg
caaatgtataaccaatttgtagtagaactgagcaagctaacctgcacactagtcgtacta
gggggcaatcacgattcagtatccaccttgaacgaatctaaacagttgctcgcttgcctg
aatacacatgtgattgccaacaccagtggcgatatagaccaacaggttatcgagctaaac
gatgaaacaggtcaagtgggggccatattgtgtgccatcccctttattcgaccccgtgat
gtactgcaaagccgctcaggagaaagcagcgaagacaagaaactcgccctaagcgatgcc
attaaggcccattacgccacgatttatcaacacgcccttacgcgccgcgaaaaacacaag
aacagtgtgaacaagcatattcccatcatcgccacgggccacttaacggcgttaggcgta
agccagtctgaatcggtgcgcgagatttatataggtaccctagatggcttcgcagcagat
ggttttccgccagcagattacatcgcgttggggcatattcaccgcccgcaaaaggtggcg
aaatctgaccacattcgctacagcggctcacctattcctctgagttttgatgagttaaag
tcgcagaaacaagtagtacttgttgagtttgataaacaaggccagcgcagcattactccc
ctggatattccgctttttcagcctatggctatgctcaaaggtgatttagacagtataaaa
gcacagctcgcccactaccctgcagcgggtgatgaaacgagcgataccgctagcactgca
gatgatgtgtttgaccaagcccccagtgaaggccaaggtgatgaaaaagatgcagggcaa
ggcgaagcacaaagagaagtagaaggaaaagacccagccaccgataaacccacttggctg
tgcatccatgtagatgtgcaagactacttgagtgatttacaacaaagcattcaaacctta
actgaagggcgcaacgtagaagtgctgcaattgcgcagaacacgcaccagagcaagccaa
ggactaaaccaaatcaacaacgaaacactggccgagctcaccccttttgaggtatttgaa
aagcgccttgaacttgaaaatttcgaaggccaagaagcacagcaacgcttaacacagatt
cgccaaacctttagcgagatagtagaagaagtgcgccacaaggaggctaaataa
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