Glaciecola sp. 4H-3-7+YE-5: Glaag_1018
Help
Entry
Glaag_1018 CDS
T01483
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gag02000
]
Glaag_1018
Transporters [BR:
gag02000
]
Other transporters
Pores ion channels [TC:
1
]
Glaag_1018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
DUF5129
Motif
Other DBs
NCBI-ProteinID:
AEE21979
LinkDB
All DBs
Position
1197919..1198746
Genome browser
AA seq
275 aa
AA seq
DB search
MFEFDSEQMSQMMDTYVIPWGINIVMAILIYIVGKIVVGIIINVFGKVMQRSKYDDMLVD
FIKAILNAILMLFVIIASLNELGVDTTSLVAILGAAGLAIGLSLQGSLQNFAAGVMLLVF
RPFKAGDFVEAGGAAGVVKSISIFTTIMTSGDNKEIIVPNGQIYSGTITNYSAKETRRVD
MVVGIGYDADLKRAKEVLKELAAADSRILQDPAPTIAVAELADSSVNFVVRPWVKAADFW
AVKFDFTEAVKLRFDQEGISIPFPQMDVHLHKDAE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatttgactcagaacagatgtcccaaatgatggacacttacgtaattccttgg
ggaattaatatcgtaatggccatcttaatttatatcgtgggtaaaatagtcgttggcatt
attattaacgtgttcggcaaggtaatgcagcgttctaaatacgacgatatgttggttgac
tttatcaaagcgatattgaacgcgatactcatgctgttcgtcatcatcgcatcgttaaac
gaattaggtgttgatacaacgtctcttgtcgctatcttaggtgccgctggtttagccatc
ggtttatctttacaaggttcattacaaaacttcgctgctggcgttatgttattggtattt
cgtccatttaaagcaggtgattttgttgaagctggcggtgcagccggtgtggttaaaagc
atcagtatcttcacgactattatgaccagtggtgataataaagaaattatcgtacctaat
gggcaaatttatagcggcactatcactaattactctgcgaaagaaacacgtcgtgttgat
atggtagtgggtattggttacgacgcagatcttaagcgtgccaaagaagtgttaaaagaa
ttagccgctgcagactctcgtatacttcaagatccagcgccaacgattgctgttgctgag
cttgctgatagcagtgttaattttgtcgtacgcccttgggtaaaagcggcggatttctgg
gcagttaaattcgactttactgaagcggttaaattacgtttcgaccaagaaggcatttca
attccattcccgcaaatggatgtgcatcttcacaaagacgcagaataa
DBGET
integrated database retrieval system
