Glaciecola sp. 4H-3-7+YE-5: Glaag_1090
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Entry
Glaag_1090 CDS
T01483
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Glaag_1090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gag03400
]
Glaag_1090
DNA repair and recombination proteins [BR:
gag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Glaag_1090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AEE22051
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All DBs
Position
complement(1284559..1287222)
Genome browser
AA seq
887 aa
AA seq
DB search
MPKTNTSASTTSSSLQQHTPMMQQYLKIKAEHPDILLFYRMGDFYELFFDDAKKASELLD
ISLTARGKSGGNAIPMAGVPYHAVENYLARLVKMGQSVAIVEQVGDPATSKGPVERKVQR
IVTPGTVSDEALLNDKQDNILAAVFCPVQKSNQALVFGYATLDVTSGRFTLCELSGEEAL
AAELQRTNPVELLYPDDFAFSHLIDQRKGLRRRPQWEFDLQTATSQLTSQFGTNELSGFG
VQNHQIGICAAGCVMQYIKDTQRSALPHIDRIVLEAHNDTVVMDAATRRNLELTLNLSGG
TENTLASILDKTSTPMGSRLLQRWIHRPLTDVTVLKMRQRNIQGLIESPYPQLQDTLKKM
GDMQRVLARLALRSARPRDFARLRQAFALLPDIQHYLEHEVSHLDNDSQQCGLSQLAQQI
FQYPDFADLLERAVIDTPPVLIRDGGVIKEGYNEELDHLRALSKGATDYLEELEQREKER
TGIASLKVGYNRVHGYFIEVSRSQSDLVPVEYVRRQTLKNNERYIIPELKEHEDNVLSSQ
SRSLALEKKLYDELFDILLPQLTQLMQSADALAELDVLANLAERAESLDYHCPDLCPQSG
IHFSQGRHPVVEQVSDAPFIANPIEVNPNRRMLVITGPNMGGKSTYMRQTALIVLMAYIG
SYIPAQDAKIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILNNATANSLVLMDEIGR
GTSTYDGLSLAWACAEYLATKLQSFTLFATHYFELTGLAEALPELANVHLDAVEHGDTIR
FMHAVQDGAANKSYGLQVAQLAGVPKQVVQAAKRKLHELETGASVKTSVARPEAQPQAIK
AEEKVETQLDLLGQPSEAEELLYSIQPDDLTPKQALEYLYQLKKLAR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaacgaacacatcagcatcaacaacctcttcatctttgcaacagcatactccc
atgatgcagcaatatttgaaaattaaagctgagcatcctgatatcctgttattttatcgt
atgggtgatttttacgaactcttttttgacgatgctaaaaaggcctctgaactactggat
atttccctcacggcacgaggaaaatctggcggtaacgctattcctatggcgggcgtgccc
tatcatgcggtggaaaactatctagcgcgcttggtgaagatgggtcaatcggtggccatc
gttgaacaagtaggcgatccggctactagtaaaggccctgtcgagcgtaaggtacaacgt
atcgtcacaccgggcacggtatcagacgaagcactgcttaatgacaaacaagacaacatc
ttagccgccgttttttgccctgtacaaaaaagcaaccaagcattggtatttggctacgca
accttagatgtgaccagcggacgcttcactttgtgtgaacttagcggagaagaagctcta
gcagctgagcttcaacgtacgaatccagttgagcttttatacccagacgactttgctttc
agtcatttaattgatcagcgcaaagggctacgtcgccgccctcagtgggaatttgactta
caaaccgctaccagccagcttaccagccaattcggtactaacgaattatcgggtttcggc
gtgcagaatcatcaaatcggtatatgcgccgcgggctgcgtaatgcaatatattaaagat
actcagcgctctgcattacctcatattgaccgaattgtgctcgaagctcacaacgacaca
gtcgtgatggatgcagccactaggcgcaaccttgaacttacactaaacctatctggcggc
actgaaaatacgctggcaagtatactggataaaacctcgacacctatgggcagccgttta
ttgcaacgctggatccacaggccactaactgacgtaaccgtgctaaaaatgcgccaacgt
aatatccaaggtttaatagagtctccctatccccaattacaagacaccctgaaaaaaatg
ggtgacatgcagcgtgtactggcgcgcttagctttgcgcagtgctcgcccccgtgacttc
gcgcgtttgcgccaagcattcgcgctattgcctgatatccaacactacctagagcatgaa
gttagtcatcttgataatgactcgcagcaatgtggcttatctcaattagcacaacaaatc
ttccaataccccgacttcgccgatctattagagcgtgcggtcattgacacgccaccggta
ttgatccgagatggtggcgtcattaaagaaggctacaacgaagagctggatcatctgcgt
gccctgtcaaaaggggctactgattatttagaagaattagaacagcgggaaaaagagcgc
accggcatcgccagcctgaaagtcggttacaaccgcgtgcatggctactttattgaagtc
agtcgcagtcaatcggatttagtgcccgttgagtatgttcgtcgccaaacactcaaaaat
aatgaacgctatattattccggagctaaaagagcacgaagacaatgtgcttagcagccaa
agccgctcattagcgcttgagaaaaaactatacgatgagcttttcgatatactcttaccc
caattaacacagctaatgcaaagtgctgatgcgttagcagaattggatgtgctagcaaat
ttggccgaacgtgccgaaagcttagattaccactgccctgatttatgcccacaaagcggt
attcattttagccagggccgtcaccctgtggttgaacaagtatcagatgctccctttatt
gccaatcccattgaggtcaaccccaaccgcagaatgttggtaatcaccgggccgaacatg
ggcggtaaatcaacctatatgcgccaaacagcactaatcgtattgatggcctatataggt
agctatatccccgcacaagacgcaaaaataggccctatcgaccggatatttacccgcata
ggggcgtcggatgatttagcttcaggtcgctcaacgtttatggtcgagatgaccgaaacg
gccaacattttgaataatgcaaccgcaaacagcttggttttgatggatgagattggtcga
ggcaccagcacctatgacggcctgtcattggcttgggcttgtgctgaatacttagccact
aaattacagtcgtttacccttttcgccacgcactattttgaattaacaggcttggctgaa
gcgcttccagagctagctaatgtgcatttagatgccgtcgagcacggcgataccattcgc
tttatgcatgctgtacaagatggtgctgccaataaaagctatggcttacaagtagcgcaa
ctagctggggtgcccaaacaagtggtgcaagcagcgaaacgcaagttacatgaacttgaa
accggcgcatctgtgaagacatcagtagcaaggcctgaagcacagcctcaagccattaaa
gcggaagaaaaggtggaaactcaattagatttactcgggcaacctagtgaagcagaagaa
ttactttacagtattcaaccggatgatcttacccccaaacaagcgcttgaatatttgtac
caattaaaaaagttagcaaggtag
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