Glaciecola sp. 4H-3-7+YE-5: Glaag_1277
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Entry
Glaag_1277 CDS
T01483
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag02020
Two-component system
gag02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Glaag_1277
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Glaag_1277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gag03000
]
Glaag_1277
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gag02035
]
Glaag_1277
Transcription factors [BR:
gag03000
]
Prokaryotic type
Helix-turn-helix
Other families
Glaag_1277
Bacterial motility proteins [BR:
gag02035
]
Flagellar system
Flagellar assembly proteins
Others
Glaag_1277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
HTH_50
AAA_16
ATPase
AAA_7
bpMoxR
AAA
AAA_2
MCM
Motif
Other DBs
NCBI-ProteinID:
AEE22238
LinkDB
All DBs
Position
1487872..1489302
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AA seq
476 aa
AA seq
DB search
MSNILIISGRPTLGHNLNTILTFLGESSTAIAFEQAVSTLKSHPVFDAVLIDALDMELAG
ELCDKFPQQPFILVDSKDANFTSGANRVGAVDEAVTYPLLTQMLHRCQEHRRMQPNRNTT
PQNKTKLFRSLVGKSNQIQNVRHLIEQVAPTDANVLILGESGTGKEVIARNVHYLSKRGT
NPFIPVNCGAIPGELLESELFGHEKGAFTGAIGARKGRFELAEGGTLFLDEIGDMPLQMQ
VKLLRVLQERTYERVGGMKPIRCDVRVVAATHRNLEEMIEQGRFREDLYYRLNVFPIDSP
ALRERHEDIPLLLQELVSRMERENAQIKFTENAMKSLMEHSWAGNVRELSNLVERLMILY
PNQLIDVGDLPHKYRHLDVDDYEPDYPEELLEREALNALFSADADSEDDSFDENTTSTEL
PPEGINLKEYISEMEVSLISQALEQQDWVVARSAEVLGMRRTTLVEKMRKYDISKA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatattctgattatcagtgggcgacccacgctcgggcataatctgaacacaata
ttgacctttctcggtgaaagcagcactgctatcgcatttgagcaagccgtcagtacgcta
aaatctcatcctgtttttgatgctgttttaatcgatgcattagacatggagctggcgggg
gaattgtgtgataaatttccccaacagccatttattctggttgatagcaaagatgccaat
tttacctctggcgccaaccgagttggagccgttgatgaagcggtaacttaccctttatta
acgcaaatgctgcatcgatgccaagaacatcgtcgtatgcaacccaaccgcaacactacg
ccgcagaataaaaccaaactatttcgcagtttggtgggcaaaagtaatcaaattcaaaac
gtacgccatcttattgaacaagtcgcgccaactgacgccaatgtacttattttaggggaa
tccggaacgggtaaagaggtgatagcgcgaaatgtgcattacctatctaagcgaggaact
aacccctttattccggtcaactgtggtgctattcctggtgagcttttggaaagtgaatta
ttcggccatgagaaaggcgcatttaccggggcgataggggcgcgaaaaggccgttttgaa
ttagctgaaggtggcacactgtttcttgacgaaataggtgacatgccactgcaaatgcaa
gtcaaattactgcgcgttttgcaggaacgcacgtatgagcgggtcggtggaatgaaaccc
attcgttgtgatgtacgggtagttgcagcgactcaccgcaacctcgaagagatgatcgaa
caagggcgttttcgcgaagatttatattatcgtttaaacgtgtttcctattgatagcccc
gcgttgcgtgaacgccatgaagatattcctctactcttgcaagagcttgtttcccgtatg
gagcgtgaaaacgcacagatcaagtttaccgaaaacgccatgaagtcgttgatggaacac
agctgggcgggcaacgtccgcgaactgtcaaacttggttgagcggttaatgattttgtat
cctaatcaacttattgatgtgggtgatttaccgcataaatatcgtcatttagatgtagac
gactacgaacctgattatccagaagagttacttgagcgcgaagcgcttaatgctttgttt
tcagctgatgcagactctgaagatgacagcttcgatgagaacaccacttctaccgaatta
cccccagagggcattaatctcaaggagtatatttcagagatggaagttagcttgatatcc
caagcgctcgagcagcaagactgggtggttgctcgctcagctgaggtgcttggcatgcgt
cgcactacgttagtggaaaagatgcgtaagtacgatataagcaaagcgtaa
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