Glaciecola sp. 4H-3-7+YE-5: Glaag_1279
Help
Entry
Glaag_1279 CDS
T01483
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag02020
Two-component system
gag02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Glaag_1279
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Glaag_1279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gag02022
]
Glaag_1279
02035 Bacterial motility proteins [BR:
gag02035
]
Glaag_1279
Two-component system [BR:
gag02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Glaag_1279
Bacterial motility proteins [BR:
gag02035
]
Flagellar system
Flagellar assembly proteins
Others
Glaag_1279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
AAA
Mg_chelatase
MerR
HTH_20
AAA_16
AAA_19
HTH_24
AAA_14
AAA_7
HTH_23
AAA_3
FleQ
AAA_22
HTH_28
DUF2089
MCM
Sigma70_r4_2
HTH_10
HTH_11
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEE22240
LinkDB
All DBs
Position
1490651..1491994
Genome browser
AA seq
447 aa
AA seq
DB search
MSQTTILIVEDDAGLREALVDTLLLGGYKVLEADCAERGLMMMNQESIDLVVSDIQMGEM
SGLSLLRSLKNKYPNVPVLLMTAYATIDDAVSAMRDGATDYMSKPFAPEVLLNLVGRYAP
AQKVLSYDPIVADPSSVKLLQLAQRVARSDATVMVLGPSGSGKEVLARYIHDQSDRAEQP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEISEMDLGLQAK
LLRVLQEKEVERLGSRKMIPLDVRVVATSNRNIRQTVDDGLFREDLYYRLNVFPLTWAPL
DKRPGDIVPLAEHLVARHRGKQGAATLGFSSSARSKMLQHNWPGNVRELENVVQRALILC
DGEKIEADDLMLESIENDLSHTQESVIEEDESKLGSELRQQEHQIILDTLQSCQGRRKDV
AERLGISPRTLRYKLAKMREVGIELPA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaacgattttaattgtcgaagatgatgctggtttgcgtgaagccttggta
gacactcttttgctcggtggatataaggtcctagaagctgactgcgccgagcgtggcttg
atgatgatgaatcaagaatctattgatttagtcgttagcgatatccaaatgggcgaaatg
agtggcctgtctttactgcgtagcttgaaaaacaagtatccgaatgtccccgttttgttg
atgaccgcttatgccacaattgatgatgcggtttcggctatgcgcgacggggcaacagat
tatatgtcaaagccatttgcacctgaagtgctgcttaacttagtgggtcgctatgcacct
gctcagaaagtgctttcatacgaccccatagtcgctgaccccagtagcgtcaaattattg
caattggcgcaacgtgttgcgcgttcagatgcaaccgttatggtacttggcccaagcggt
tcaggaaaagaggtactggcgcgttatattcatgatcaatctgatcgcgcagaacagcct
tttgtcgcaattaattgcgcagctatcccagaaaatatgcttgaggcgaccttatttggc
tatgaaaaaggggcctttactggcgccattcaagcctgcccaggaaaatttgagcaagca
caaggcggtactattttacttgatgaaataagtgaaatggacttaggtttacaggcaaaa
ctattgcgcgtgcttcaagagaaagaagtagagcgattaggtagccgcaaaatgatcccg
ctagatgtgcgggtggttgcaacaagtaaccgcaatattcgccaaaccgttgacgatggc
ttattcagagaagatttatactatcgcttaaatgtgtttccgctaacttgggcacctctt
gacaaacgtcctggtgacatcgttccactggctgaacatttggtggcacgccaccgtggt
aagcagggtgcagctacacttggcttctcttcatctgcgcgcagtaaaatgctacaacac
aactggcctggcaatgtacgagagctagaaaacgttgtgcaacgagcccttattttatgt
gacggagaaaagattgaggcagatgatcttatgcttgagtctattgaaaatgatttgagc
catactcaggagtctgtgatagaagaagacgaaagcaagctaggctcagaacttcgtcag
caagagcatcaaattattcttgatacattacagtcttgccaaggccgcagaaaagacgtt
gcggagcgcctaggaataagtccacgtacactacgctacaagctagcgaaaatgcgcgaa
gtgggtatcgagttgcccgcttaa
DBGET
integrated database retrieval system
