Glaciecola sp. 4H-3-7+YE-5: Glaag_1426
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Entry
Glaag_1426 CDS
T01483
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag03030
DNA replication
gag03430
Mismatch repair
gag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Glaag_1426
03430 Mismatch repair
Glaag_1426
03440 Homologous recombination
Glaag_1426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gag03032
]
Glaag_1426
03400 DNA repair and recombination proteins [BR:
gag03400
]
Glaag_1426
Enzymes [BR:
gag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Glaag_1426
DNA replication proteins [BR:
gag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Glaag_1426
DNA repair and recombination proteins [BR:
gag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Glaag_1426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_14
AAA_5
AAA_16
AAA_22
AAA_2
AAA_18
Rad17
AAA_assoc_2
nSTAND3
PIF1
AAA_7
AAA_19
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AEE22385
LinkDB
All DBs
Position
1652370..1655051
Genome browser
AA seq
893 aa
AA seq
DB search
MSYQVLARKWRPNNFSELVGQEHVVAAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCELGMGSKPCGQCSTCVEIEQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPTRGRY
KIYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR
AQIAQQLKHVFNQEQLENEPEALAQLARAAQGSMRDALSLSDQAIAQGNGNVSLSIVTDM
LGLMDKTQVLKLLNAVLNKQNDLVFELVELMSEQAVDYSQVLNELMSLLHQVALTQFVPD
ACKLETISARAIYQLAKNAVPEHIQLLYQINLQGKRDMPFAADARTGLEMTLLRMLAFSP
VQSNTSIEELVAMTPSPSKQPAPEQQAQSESSETAQIASTVTLDAVPEKTEQEPQVAEIT
PEVASSQLTAAPLTQTATAHTQTAAAPQAQAASQPSSITQSDVKPPHQTPTGETRETRDE
PRDTASPDAGPEQNLPADEASAQQFDDDEYYSAQMQDMEAQQADILQEAAHFIQPEYAQQ
TSDALGEHSQTQSASKPQSQTTESLLALRRKLTQTATDEEENAPSVKKSEGGYDTSQFLP
GGSGPGVEPMAGAVPRKQSTPEQPTTTGVQNAPQPAGHDTSSADDALTQDELNQDLPREN
VAVVNSEYENTQNAFEPSQNNTAGAEEAPPWASDDAYNGNAAQDDIARGETTLDAATAPV
DEQENFSNNEQAIENTVFDPTAHLAQDLECEVNYDVPAFLESGEKVTIAPQLDKWSALIT
QMQVAALTKQLALHSEFTREGDKVILNLVQSKEHLNTESAKEQLQYALSEVLQQDIKLEV
HVGDAINTPFALQQSINRVRLEHAKQVVETNEAISMFKDMFNAQVLTDSIKAR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagttctagcgcgaaaatggcgaccgaataacttcagtgaattagtcggt
caagagcatgtagtcgcagccatttcaaatgcacttgataatgaccgcttacaccacgct
tacttgtttactggaacgcgtggtgtaggtaaaaccaccatcgcacggattttctcgaaa
agtctgaattgcgaattgggtatggggtcaaaaccttgtggtcaatgttcaacctgcgtg
gagatagagcagggcaattttgttgatcttttagagattgacgcggcctctcgaaccaaa
gttgaagacacccgagagttactagacaacgtacaatatcggcccactcgtggccgatat
aaaatatatttaatcgatgaagtacatatgttgtctaagcatagttttaacgctttgctt
aaaacccttgaagagccaccgcctcatgtaaagtttttgttggccacgaccgatcctcaa
aagctacccattaccattttgtctcgttgcttacagttcaatttgaaagccctatcgcga
gcacaaattgcccagcaacttaagcatgtttttaaccaagaacaacttgaaaatgagcct
gaagcactggcgcagcttgcaagagcagcccaggggagtatgcgcgacgcattaagttta
tctgaccaagccatcgcccaaggcaatggcaatgttagtttaagcatcgtcaccgacatg
ctcggcttaatggataaaacccaagttcttaagttactgaatgccgtgctgaataagcaa
aatgacctggtgtttgagttagttgaactgatgtcagagcaagcggttgattatagccaa
gtgctaaacgagttgatgagtttgctacatcaagttgccctgacgcagtttgtgcctgac
gcatgtaagcttgaaacgatttcagcgcgagccatttatcagttagcaaaaaatgcggtg
cctgagcacattcaactgctttatcaaatcaacttgcagggcaagcgggatatgccgttt
gccgcggatgctagaacaggtcttgaaatgacactgctgcgcatgttggcttttagccca
gtgcagagcaacaccagcatagaagagctagtggcgatgacgccaagcccttcaaagcag
ccagcgccagagcaacaagcacagtctgaatcatcagaaaccgcacaaatagcgtcaacg
gtaacgcttgatgccgtgcccgaaaagacagaacaagaaccacaagttgctgaaataaca
cctgaggttgctagctctcaattaactgcagctccgctcactcaaactgccacggcgcac
actcaaactgcagccgcgccgcaagcgcaagcagcgtcgcaaccgtcttcgattacgcaa
agtgacgttaagccgcctcatcaaacgcctacaggcgagacgagagaaacgcgtgacgag
ccgcgcgatactgcgtcaccagatgcggggccagagcaaaacctgcctgcagatgaagcc
tcagctcagcagtttgatgatgacgaatattacagcgcgcaaatgcaagacatggaagcc
cagcaagctgatattttgcaagaagcagcgcattttattcaacctgagtatgctcagcaa
acaagtgatgcgcttggtgagcacagccaaacgcaaagcgcgtcaaaaccacaaagccaa
acgactgaaagtttgctcgccctgcgccgaaagttaacgcaaacagcgacagacgaagag
gagaatgccccttcagtaaaaaagtctgaaggcgggtatgataccagtcaatttttgcct
ggtggcagtgggccgggtgttgaacccatggcaggagcagtgccaagaaagcaatcgacg
cccgaacaacctacgaccactggtgttcaaaatgcacctcagccagccggccatgatact
tcatctgcggatgatgcactgacacaagatgagcttaatcaagatctgcctcgtgaaaat
gttgctgtggtaaattctgagtatgaaaacacccaaaatgcattcgagccaagccaaaat
aataccgctggtgctgaagaagcaccgccttgggcgtctgacgatgcctacaatggtaat
gcggcacaagatgatatcgctcgcggtgaaacgactttagatgcagcaactgctccggtt
gacgagcaagagaatttctcaaacaacgaacaagcaattgaaaatacggttttcgacccc
actgctcacttagcacaagatttagaatgtgaagttaattatgacgtaccagcatttcta
gaatcgggtgaaaaagtcactatcgcgcctcaactagataaatggagcgccttgataaca
caaatgcaggtagcggcactgactaagcaacttgccttgcactcagagttcacgcgagag
ggcgacaaggtgatacttaatttggtgcaaagtaaagagcacctcaacactgagtcagcc
aaagagcaattgcaatatgctcttagcgaagtgttacagcaagacatcaagttagaagta
catgtaggtgacgcaatcaatacgccatttgctttgcagcaaagtatcaatcgggttcgg
ttggaacatgctaagcaggtagtagaaaccaatgaagccattagcatgtttaaagacatg
ttcaatgcacaagtgctgactgattcaatcaaagcacgataa
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