Glaciecola sp. 4H-3-7+YE-5: Glaag_1738
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Entry
Glaag_1738 CDS
T01483
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Glaag_1738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gag03400
]
Glaag_1738
Enzymes [BR:
gag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Glaag_1738
DNA repair and recombination proteins [BR:
gag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Glaag_1738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEE22688
LinkDB
All DBs
Position
2016309..2019788
Genome browser
AA seq
1159 aa
AA seq
DB search
MLHLVQSNKMESLAAYLIGWLGESKSSLESIFSPDVVLVQSPGMAQWLKIEIAQALGISA
NIEFPLPSSYIWQLYKSHVNDLPEQSAFTKDNMTWKLMSILPSMSEQTEFASIAQYLDEQ
QPLKLYQLCQKIADIYDQYLVYRPEWILAWEKGENTLDDTDVDAQPWQPILWRALVAYAK
ELAESPYHRANLHTRLLQELEQSPSTNTSLKPLFVFGLSAMPVQQLEIFSALAKNRDVII
FWFNPSAHYWGDIVDNKQVLQAKLQSLLVQANEAEQGGLSGVDDYLLVGNPLLASWGKQG
RDYQDMILALEVELHDAFIEQEPHSLLEHLQHEVLALTHRGAMEPLSAQELLSNGEQYPK
IPIDNDDMTLQVHACHSAVRELEVLHDQLLHLFAQNPELHPGDVIVMMPDVASYAPIIDG
IFGGTDKGLSIPYAISDRNAQQESPLLNSFIQLMSLHQSRIGLSDVLALCEVPAVQRKFD
ISPEEFDLLSVWLAEAGVRWGWDGQDKTRWSLPSEPQNTWLFGLQRLLAGYAMGGQSMFD
DAHGQIAPYEQIEGQHVVALGKFYMFSQALGNALAFCQRSDSLRAKIEDALQLIDALYLP
DDDDQTYILQLRQSLQQMTLHGHQFEGDIVHDVFLAELEKSLSSKGVGQRFLAGYVNFCT
LMPMRSVPFKVVCLLGLNEGDYPRQVVPVGFDLMRIGKARRGDRSRRLDDRYLFLEAILS
ARKRLYLSFQGYSAKDNSERSPSILLSELLEYTEQTFCLAGDDVLPVKDCAENLLQHLYH
EHALQPFNPVYFTPDTTTGIANSFQTHWLALAQQLSVGTFHADKEVDFCSAPLKVLPEHS
QTSAVELDELLAFFSNPAKAFFTQRWQTRLTRIYEAQSDDEPFELDALARYILNERFVVT
QQEDWTTRLRAEGKLPTGNIADISLQPVYKQSQALLDAIVEVIGGPLDEVPAQRVEINFT
LNNLLAMTTDGTKVKTEDEVHASAQNPGAATTQSMQITGWVNTLYGGNLVLWRAGKVKGN
NVLHLWLTWLALCANGSVAKPQRAYFIGVDDKAPFSIEAIGMAEAKTQLAVFIHYWRLGQ
QQVLHFYPKTAFEWLSVQDEAKAWVKAQNAFYGSYFAKGEGDEPHIRRVCPDLQQHFSAF
SEVSNALFGPLLDRLGEAS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatctggtgcagtcaaataaaatggaaagccttgctgcctatctgatcggttgg
ttaggtgagagtaaaagttcgctagaaagcatcttctccccggatgtggtgctagtgcaa
agcccaggtatggcccagtggctaaaaatagaaattgcgcaagcgctgggtatttcggct
aatatcgagtttccgctcccctctagttacatatggcaattgtacaaaagccacgttaat
gatttacccgaacagtcagcttttaccaaagacaacatgacatggaaactcatgagcatt
ctgccgagcatgagtgagcagacagagtttgccagcattgcccaatatcttgatgagcaa
caaccattaaagctttatcaattatgccaaaaaatagcggatatttacgatcagtatttg
gtttatcgccctgaatggatcctcgcatgggaaaagggtgaaaacaccttagacgacaca
gatgtagacgctcaaccttggcagcctattttatggcgggcgttggttgcatatgccaaa
gagctggcagagtccccttatcatagggcgaacttacatacgcgtttattgcaggaactt
gagcagtcgcctagtactaatacgtctcttaaacccttatttgtgtttggtttgtcagct
atgccagtgcagcaattggaaatattttcagcactggcaaaaaaccgcgacgtgatcata
ttctggtttaaccccagcgcccattattggggggatatcgttgacaacaaacaagtgctg
caagccaaattgcaaagtttattagtccaagcaaacgaggctgagcagggcggtctaagc
ggtgtggacgattacctgctggtggggaaccctttgttagcctcttgggggaaacaaggg
cgagattaccaagacatgatcctcgcattagaggtagagctgcatgatgcttttattgag
caagagcctcatagtttgcttgagcatctacaacatgaagtattagccttaacccatcgc
ggggcgatggagccgttgtctgcacaagagctattatcgaacggtgagcagtatccgaaa
attccaatcgacaatgacgatatgacactgcaagtgcacgcctgccattccgcagtgcgt
gaacttgaagttttacatgaccagctattacaccttttcgcccagaatcctgaactgcat
cccggcgatgtgatagtcatgatgcccgacgtggcaagctatgcgcctataattgacggt
atatttggtggaactgataaagggctttcgatcccgtacgcgatttcagatcgcaacgca
caacaggaatcgccattactgaatagctttatacagctaatgtcattgcatcaaagtcgt
atcgggttgtcagatgtgttggccttgtgtgaagtgcctgctgtgcaacgtaaatttgat
atttccccagaggagtttgatttactcagcgtttggcttgcagaagcaggtgtgcgctgg
ggctgggatgggcaagataaaacccggtggtcactaccaagtgagccacaaaatacctgg
ttattcggtttacaacgtttacttgccgggtacgccatgggcggccaaagtatgtttgat
gatgcccacgggcaaattgccccttacgagcaaattgaagggcagcatgtggtcgcatta
ggaaagttttatatgtttagccaagcgctaggcaatgcactggcgttttgtcaacgttca
gacagtctcagagcaaaaattgaagatgctttgcaactcatcgatgcactgtatttgccc
gacgatgatgaccaaacttatattttacaattgcgccaatcgttgcagcaaatgaccctc
catgggcatcagtttgagggcgatattgtgcatgatgtctttctggctgagcttgagaaa
agtttgtccagtaaaggggtagggcaacggtttttagcaggctatgttaatttttgcacc
ctgatgccgatgcgcagcgtgccctttaaagtggtgtgcttgttagggctaaatgaaggg
gattacccaaggcaagttgtacccgtaggctttgacttaatgcgcataggcaaagcgcga
cgaggagaccgttcgcgaagattagacgacaggtacttatttcttgaggcaatattatca
gcgcgtaaacgtttgtatttaagttttcagggctatagcgctaaagacaactccgagcgt
agcccatccattttgctcagcgagttacttgaatatacagagcaaaccttctgcttagcg
ggggatgacgtactgcctgttaaggattgcgcagaaaatttactgcaacatttgtatcac
gagcacgccttacaaccgtttaacccagtgtatttcaccccagacacaacaacgggtatt
gccaatagctttcaaacgcattggttagccctggctcagcaattgagtgtgggaacattt
catgctgacaaagaggtcgatttctgttccgcgccgcttaaggtactacctgaacacagc
caaacatcggctgtggaattagacgagctgttggcgttttttagtaatccggccaaagcg
tttttcacccaacgttggcaaactcgattaacgcgtatttacgaggcgcaaagcgatgac
gagccatttgagttagatgcgctcgcgcgctacatactcaatgaacgatttgtagtgacc
caacaagaggattggacaacacgcctacgggcagaaggaaagttgcccacgggtaatatt
gccgatattagtttgcagccagtttacaagcagtcacaagcgttgctcgatgcgattgtc
gaggtgattggtggcccactagacgaggtgcccgcgcagcgtgtagagataaactttacc
ttgaataatcttctggctatgacaaccgatggaacgaaagtcaaaaccgaggatgaggtg
catgctagcgcacaaaacccgggcgcagcaacaacgcaaagtatgcaaataacgggctgg
gtaaacacactctacggcggaaatttagtactttggcgagcggggaaagtcaaagggaac
aacgtattacacttgtggttaacttggctagccctatgtgccaacggtagtgtggccaag
ccccaacgcgcctattttatcggtgtagatgacaaagcgccttttagtattgaagctatt
ggcatggcagaggcgaaaacccaattggccgtgtttattcattattggcgtttggggcag
cagcaggtactacatttttatcctaaaacggcctttgaatggctcagcgtacaagatgaa
gcaaaagcttgggtaaaagcgcaaaatgcgttttatggtagttatttcgctaaaggcgag
ggagatgaaccgcatattcgccgtgtatgccccgatttacaacagcactttagcgcgttc
agcgaagtgagcaatgccttgttcggccccttgcttgataggttaggagaggcgtcatga
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