Glaciecola sp. 4H-3-7+YE-5: Glaag_1740
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Entry
Glaag_1740 CDS
T01483
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Glaag_1740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gag03400
]
Glaag_1740
Enzymes [BR:
gag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Glaag_1740
DNA repair and recombination proteins [BR:
gag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Glaag_1740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
RecD_N
Helicase_RecD
SLFN-g3_helicase
UvrD-helicase
UvrD_C
AAA_22
AAA_28
Herpes_Helicase
nSTAND3
T2SSE
CbiA
AAA_12
AAA_16
PhoH
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AEE22690
LinkDB
All DBs
Position
2023726..2025894
Genome browser
AA seq
722 aa
AA seq
DB search
MVTDSMVKQMANNDDASKTKQLDAQASVAAQVPTTTSILQNLLKIGRIRPLDVAFAEFVM
LHEPGKHAVDVNGIHVVGLLAAYLSSRLGEQDSCLNLDNTYQPFLPFYRFESIDQLLPML
SASTCVAVVDERYTGEVANASTDKSTEKNALKSTASTSCEPVFAPQSQPLILQGSELYMQ
RYWQYEVQLASKINSMSGRATTLDVAQGQALLAQLFATHESKGSLAKNSLAKNSLAKNSA
QDQQAAPIDWQQVAVCLAASQNVSVITGGPGTGKTTTVIRLMALLQGLARHAHKKLQIKL
AAPTGKAAARLSQSISAAMGKLPTALQADLPNQCSTIHRLLGSIANSPYFRFNAQHPLHL
DVLIVDEASMVDLPLMSKLFAALPAHAKIILLGDKDQLASVEAGSVLSDICAAALNFSPT
VYDQPPPYSDEALRVIKDLCQIDLQVSTPNKAPISNSLALLHKSYRFSEKSGIGRLARAI
NSGKLAPSKALFADERYPDVVWQTSDEPKALVAKLLPDYQAYFEHVKHVCAQGTLHSKGL
EVFSLLQQQQVLCAQKEANWGVLQVNALIESELNKKGAIELGRDFYPGRPVMLKQNDHSL
GLFNGDIGIVMPDADNDELMKVWFVTEQNTLRGVLPSRLPPHDTVYAMTIHKSQGSEFDH
VYLCLPRVETGSQARLLSRELLYTGLTRAKKSFTLYSDEQALSLSIARRCQRGSGLAKRL
LF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccgattcaatggtaaagcaaatggccaacaatgatgatgcatctaagacaaaa
cagctagatgctcaggcatctgtcgctgcacaggtaccaaccacgaccagtatcttacaa
aatttgttgaaaatagggcgtattcgcccattggacgtggcatttgctgaatttgtaatg
cttcacgaacctggaaaacacgctgtcgatgtgaacggtattcatgtggtggggttattg
gcagcttatttaagtagccgcttgggggagcaagatagctgccttaatctagataacact
tatcagccctttttgcctttttatcgcttcgaatctatcgaccaactattgcctatgtta
agcgcatcgacttgtgttgctgtggttgatgagcgatacacaggggaggtagcgaatgcc
agcactgataagagcactgaaaaaaacgctttaaaaagtacggcatcgacaagctgcgag
cccgtgtttgcgccccaaagccagcctcttattttacaaggcagtgaactttatatgcag
cgttactggcaatatgaagtacagctggcgagtaaaataaatagcatgtcggggcgtgca
acgacgttagatgttgcccaaggccaagccttactagctcagctgtttgctacgcatgaa
tcaaaaggcagcttggctaaaaacagcttggcaaaaaacagcttggcaaaaaacagcgca
caagatcagcaagcagcacctattgactggcagcaagtggcagtgtgcctggcggcaagt
caaaatgttagcgttataacaggcggcccgggtacgggaaaaaccaccacggttatacga
ttaatggctttactgcaggggctagcaaggcatgcacataaaaaactgcaaattaaactt
gccgcgccgaccggaaaggccgcagcgcgtttgagtcagtctatcagtgcggctatgggc
aaactgcccacggctttacaagcagatttacccaaccagtgcagcaccatacataggtta
ttaggcagtattgcgaacagtccttattttcgttttaacgctcagcatcccctgcattta
gatgtgttgatcgtggatgaagcctccatggttgatttacctctgatgagcaaattattt
gcggcgttacccgcccacgccaaaatcattctgctgggggataaagatcaacttgcctcg
gtagaggcgggcagtgtgctgtcagatatatgcgccgcagcgcttaatttctcgcccact
gtgtatgatcagcccccgccatacagcgatgaggcattgagggtaattaaagatttgtgt
caaattgatctgcaggtaagtacaccaaacaaagcaccgatcagtaatagtttggctttg
ctacataagagttatcgtttcagtgaaaaaagcggtattggtcgcttagcgcgggcaatt
aatagtggcaaattagccccttcaaaagcgttattcgctgatgagcgctacccagatgtt
gtttggcaaaccagcgatgagccaaaagccttggtggctaaactattgcctgattaccaa
gcctattttgagcatgtaaaacacgtttgtgcgcaaggaacgctgcatagtaaggggctt
gaggttttcagtttgttacaacagcaacaagtcctgtgcgcacaaaaagaggcgaattgg
ggcgtactacaagtcaacgcgctgatagaatctgaactcaataaaaagggcgctattgaa
ctagggcgtgatttctaccccggtcgccctgtgatgcttaaacaaaatgatcatagttta
gggctctttaacggtgatattggcatagtaatgccggatgctgataacgacgaactgatg
aaagtgtggtttgtcacagagcaaaataccttgcgaggggtgcttccgagtcgcttgccc
cctcatgacacagtgtacgcgatgacaattcataaaagccaaggctcggagttcgatcat
gtttatttgtgtttgccacgggtagagacaggctctcaagctcgattactcagccgtgaa
ttactttatacgggcctaacgcgggcgaaaaagtctttcaccttgtacagcgatgaacag
gcgctctctcttagtattgcaaggcgctgtcagcggggcagcggtttagccaaacgctta
ctcttttaa
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