Glaciecola sp. 4H-3-7+YE-5: Glaag_1880
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Entry
Glaag_1880 CDS
T01483
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gag01011
]
Glaag_1880
Enzymes [BR:
gag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Glaag_1880
Peptidoglycan biosynthesis and degradation proteins [BR:
gag01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Glaag_1880
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_OapA
WxLIP_HBD
Motif
Other DBs
NCBI-ProteinID:
AEE22826
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Position
complement(2191717..2193381)
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AA seq
554 aa
AA seq
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MRLKTLLCLSLVSILPACQMMEPHSEIAEQIDQEHEIAQKIADTCEQAGELANDEYDCEA
ADEGTIPITHPEEEVEVVIAPEPIPEDVEVLDVWQQVGQNLSFEFEDNQRIVSQRNWYLK
HPSYMQRVAKRAKPFLYLIVERLKSQDMPMELALLPIVESAFDPFAYSHGRAAGMWQFVP
ATGKRFGMKQTWWYDGRRDVMASTDGAIAYLKYLNEMFDGNWLHALAAYNSGEGRVMRAI
KKNKKAGKSTEYWALDLPKETRAYVPKLLALADILKNADTYAFKWPVIENIKVTEEVDVG
SQIDLALAADMAGLTVEELHALNPGYNRWATDPEGPFKLLVPVDKVETFSQAIAATATKE
RLNWVRHKIKSGDSLLKLAHQYHTTTDIISQVNELKGNVIRAGEYLVIPVALKSLDFYSL
SQEQRLADRQSKHKSGTYKVKHTVKSGDTMWDISRKYKVNMRSLAKWNGMAPTDMLRPGK
ELVVWLKGSKGTKTRADAVMRTLTYTVRGGDSLARIAQKFKVNVSDLVTWNQISTKKYLQ
PGQKLKIKVDVTRT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttaaaaaccctactatgcctatcgctagtgtcgattttaccggcctgtcaaatg
atggagccccattcagaaatagcagaacagatagatcaagagcatgaaatagcgcaaaaa
atcgctgatacctgcgaacaagctggcgagttagcgaatgacgaatacgattgtgaagca
gcggatgaaggcacgatccctattactcaccccgaagaagaggtagaggttgttatcgcg
ccagaaccgatccctgaagacgtagaagtgttagacgtttggcaacaggtgggacaaaat
ttatcattcgaatttgaagacaaccaacgcatcgtaagtcagcgcaattggtatctcaaa
caccccagctatatgcaacgcgttgccaaacgcgccaagccgtttttatatctcatcgta
gagcgccttaaaagccaagacatgccgatggaattagcacttttacccatcgttgaaagc
gcttttgaccccttcgcttactcccacggtcgcgcagctggcatgtggcagtttgtgcca
gcaaccggtaaacgctttggtatgaagcaaacctggtggtatgacggtcgccgtgacgtg
atggcatctaccgatggcgccatcgcctacttaaaatatttaaatgaaatgttcgacggt
aactggctgcatgcacttgccgcctataacagcggtgaaggccgtgttatgcgcgctatt
aaaaagaacaaaaaagccggtaagagcactgaatactgggcgctagacttacctaaagaa
acccgcgcatacgtgccaaagttattggcactagcagatattctaaaaaatgccgatacc
tatgcattcaaatggcctgtcatcgagaatataaaagtcactgaggaagtcgatgttggc
tcgcagattgatttggcgctcgccgcagatatggctggtcttaccgtagaagagcttcac
gcattaaaccctggctataaccgctgggcaactgacccagaaggcccgtttaagctgctt
gtgcccgtcgataaggtcgaaacgtttagccaagctatcgccgcaacagccaccaaagaa
cgcctaaattgggtgcgtcacaaaatcaaaagtggtgatagcttgttaaagctagcgcat
cagtatcacaccactacagatattattagccaagtgaacgagttaaagggcaatgtgata
cgcgcaggcgagtatttggtgatccccgtggcattgaaatcgttggacttttactcccta
tcgcaagagcagcgtttagccgataggcagtcaaagcacaaaagtggcacctataaggtt
aagcacacagtaaaaagtggcgacaccatgtgggacataagccgtaagtacaaagtcaat
atgcgcagtttagccaaatggaatggcatggccccaactgacatgcttcgcccaggtaaa
gagctcgtagtatggcttaaaggcagtaaagggacgaaaacccgggccgatgccgtaatg
cgcacgcttacttataccgtgcgcggcggagattcattggcaagaattgcccaaaaattt
aaggtcaatgtgtctgatttggttacatggaaccaaatcagtaccaagaaatacctacaa
ccgggccagaagttaaaaattaaagtggacgtcactcgcacctaa
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