Glaciecola sp. 4H-3-7+YE-5: Glaag_2516
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Entry
Glaag_2516 CDS
T01483
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gag03032
]
Glaag_2516
03036 Chromosome and associated proteins [BR:
gag03036
]
Glaag_2516
03400 DNA repair and recombination proteins [BR:
gag03400
]
Glaag_2516
DNA replication proteins [BR:
gag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Glaag_2516
Chromosome and associated proteins [BR:
gag03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Glaag_2516
DNA repair and recombination proteins [BR:
gag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Glaag_2516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AEE23458
LinkDB
All DBs
Position
complement(2954743..2955033)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIERLADKARHVPSRDVELAIKEMLEQMAQTLQKGERIEIRGFGSFSLHYRAPRV
GRNPKTGETVELDGKHVPHFKPGKELRERVNEDLIA
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtcagaacttatcgaaagactagcggataaagcccgtcacgtaccttcaaga
gacgttgagttggctatcaaggaaatgctagagcaaatggcgcaaaccctacaaaaaggt
gagcgtatcgaaatccgcggatttggaagtttctctttgcattaccgcgcacctcgcgta
ggtcgtaatcctaaaacaggggaaacagtagagttagatggtaaacatgtacctcacttc
aaacctggcaaagaattacgagaaagggtcaacgaagatttaattgcttga
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