Glaciecola sp. 4H-3-7+YE-5: Glaag_2555
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Entry
Glaag_2555 CDS
T01483
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag03030
DNA replication
gag03430
Mismatch repair
gag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Glaag_2555
03430 Mismatch repair
Glaag_2555
03440 Homologous recombination
Glaag_2555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gag03032
]
Glaag_2555
03400 DNA repair and recombination proteins [BR:
gag03400
]
Glaag_2555
Enzymes [BR:
gag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Glaag_2555
DNA replication proteins [BR:
gag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Glaag_2555
DNA repair and recombination proteins [BR:
gag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Glaag_2555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Elong_Iki1
Motif
Other DBs
NCBI-ProteinID:
AEE23496
LinkDB
All DBs
Position
complement(2997275..2998030)
Genome browser
AA seq
251 aa
AA seq
DB search
MFYLDKSTLQDKPDLRRLGKGTDWGVEYAKRQKSARYPALKRFYAQGAVSGDTPLCEAPL
VALDFETTGLNPKTDSIVSIGLVAMTTQRIRCAQAQHWIIKPDTELKSKSVVIHGITHSD
VADAPTFNRVLDELLEHLQGKVVVAHHKDIESRFLNSAMKQYIGEEIVFPCIDTMSLEAR
FSRTFKRTFLRSLLGQKTPSIRLTDCRSRYHLPYYRQHNALTDATACAELLQAQIATHYS
DEATPISAIWC
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgttttatctagataaaagtaccctgcaagataaacccgatctgcggcgcttaggcaag
gggactgactggggagttgagtatgcaaagcggcaaaaaagcgctcgctatccagcgctt
aagcgtttttatgcccaaggagccgtcagtggtgatacgccgctctgcgaggctccactg
gtggcgttagattttgaaaccacaggcttaaacccaaaaacagacagtatcgtcagtatt
ggtttagtcgccatgactacccagcggattcgctgtgcccaagcgcagcactggatcatc
aaacctgatactgaattgaaaagtaaatcggtggtgatccatggtattactcattcagat
gtagccgatgcaccaacatttaatcgggtgttagatgaattgctagaacacttgcaaggc
aaagtggttgtggctcaccataaagatatcgaaagccgttttttgaattcagccatgaag
cagtatattggcgaagaaattgtgtttccgtgtattgataccatgtccttagaggcacgt
ttttcacgcacctttaagcgtacctttttacgcagtttgttggggcaaaaaacaccctcg
attcggttaacggattgccgctcgcgatatcatttaccttactatcgccagcacaatgca
ttaaccgatgccacagcctgtgcggagcttttacaggcgcaaatagccacgcattactca
gatgaagcgacgcctatctccgcgatctggtgctaa
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