Glaciecola sp. 4H-3-7+YE-5: Glaag_2886
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Entry
Glaag_2886 CDS
T01483
Name
(GenBank) NHL repeat containing protein
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
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Gene cluster
GFIT
Motif
Pfam:
NHL
Collagen
Motif
Other DBs
NCBI-ProteinID:
AEE23823
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Position
3354693..3356789
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AA seq
698 aa
AA seq
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MIRNTQTKNTSTRKFVTTLIGLSVALSLTACDGDDGAQGPQGEQGEMGTPGNDGQPGTPG
FAAAQFLISNNGPDNAGTVDLVDQNAAKLKTLSSGNNEGIALDPLNNLVHAGDATTGSLR
FLCGIGQRAEDNAFNTIEDREITGANTGLVNPKGIDIAHSAGLVLVADFNGMRISVFGSA
AAGDVAPLAETLTDAKPWDLDYDEVNDRLFVALTDGTIAVYDDYVSGGFAAMPARVITPS
DDTQSTISVNIHGIVYDRETNKLVVSDVGDAASATDGTIFVIDNAASADGNVSVARSISG
PLTLLGNPVDIVLSGTDLRVAEKSNDAILVFSNIFSGSSGDIAPTLTTSSIKPESLVQVT
EANNNADASDIATTNISFNGIAVSGNPAAGADTFGMIAKFNTSLNTQLSGYDYSQSIESV
AFDIAGDAYATFDDPDTGTAGILVGNRVAKSRDTESFDTARDRVIAGENTGLVTPKGLDV
ASNSGLLFVAENNATTPGILVFSLCASGDAAPVLTLNLADNARPWDVDYDASTDRAYVAL
TNGTVAVFDEVTARMNSGMTTLTAQDRTIIPAVGGTALLAPSNIHGIDFDPASGNLILSD
VGSAADATDGKLYVLSAADSADGLTEIQVNIGGANSNLGNPVDIMYSGSDLFVAEKSNNV
IMRFDNILASEGGDIAANATISFNAPESVALIPHYISE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggaatacacaaacaaagaatacgtcaacccggaaatttgtaactacattgatt
ggtctatccgtcgctttatcgcttacagcctgtgatggcgatgatggcgcccaaggtcca
caaggcgagcaaggggaaatgggtaccccaggtaatgacggccaaccaggcacgcccggt
ttcgcagcagcgcaattcttaatatcaaataacggccctgacaatgcaggaaccgttgat
ctagtcgatcaaaatgcggccaaactaaaaaccctttctagcggcaacaatgaaggcatc
gcccttgatccacttaataaccttgtacacgctggcgatgccaccacaggcagtttgcgt
tttctttgtggaattggacaacgcgccgaagataacgcatttaatacgattgaagaccga
gaaattaccggcgccaacactggtttagttaaccctaaaggtatcgacatagcacatagt
gctggcttggttttggtcgctgacttcaacggtatgcgtatcagtgtatttggctcagcc
gctgcgggcgacgtcgcccctctagcagaaaccttaacggacgccaaaccatgggacttg
gattacgatgaagtcaacgatcgtttattcgtggcgctaaccgacggtactattgcggtt
tatgacgactatgtatcaggtgggtttgctgccatgcctgcccgcgtgatcacccctagt
gacgatactcaaagtacgatttcagtaaatattcacggtattgtgtacgaccgtgagaca
aacaaactggttgtcagtgatgtgggtgatgcagcatctgccactgacggcactattttt
gtcatcgataatgctgctagtgccgatggaaatgtcagtgttgcacgttctatttctggt
ccgctgacattattgggtaatccagtcgatatcgtacttagcgggacagatttacgtgta
gcggagaaatctaacgacgccatactggtgttttcgaatatattttctggttcaagtgga
gatatcgctccgacgttaaccaccagcagtataaaacctgagtcattagtgcaagtcact
gaagcaaacaacaatgcagacgcatcggacattgccactaccaacatcagttttaatggt
atcgcggtaagtggaaacccagcagcaggcgctgatacttttggtatgattgctaaattt
aacacgtcattgaatactcagctcagcgggtacgattacagtcaaagcatagaaagcgtt
gcatttgacatcgcaggcgatgcctacgcaacctttgatgatccagatacaggtacagcc
ggtatactcgtgggtaaccgcgttgctaagtctcgcgatacggaatcattcgataccgcc
agagacagagttattgccggtgaaaacacaggactcgtcactcccaaaggcttagacgtg
gcgtcaaatagtggcttactgtttgtggccgaaaataacgccaccacgccaggaatattg
gtattttctttgtgcgcctcaggcgatgctgctccagtactaaccttaaatcttgccgac
aatgcccgtccgtgggacgttgattatgatgcgagtacagaccgagcatatgtagcgcta
accaatggtacggttgccgtatttgatgaagttaccgcgcgtatgaatagcggcatgacg
acgttaacagcacaagatcgtacgataattcctgctgtaggcggcaccgcattactcgca
ccatcaaatatccacggcattgattttgatccagcgtcaggtaacttaattctatccgat
gtaggcagcgcagctgatgcaactgatggcaaactatacgtattatcggccgctgattca
gcagatggactaaccgaaatacaagttaatattggcggtgcaaactccaatttaggcaac
cctgttgatattatgtattcgggcagtgatctattcgtagcagagaagtcaaataacgtg
atcatgcgttttgacaacatcttagccagcgaaggaggagacatcgctgccaatgcaacc
atcagctttaatgcgcctgaatcggtcgctcttattccgcattatatttctgaataa
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