Glaciecola sp. 4H-3-7+YE-5: Glaag_3756
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Entry
Glaag_3756 CDS
T01483
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Glaag_3756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gag03019
]
Glaag_3756
03110 Chaperones and folding catalysts [BR:
gag03110
]
Glaag_3756
03029 Mitochondrial biogenesis [BR:
gag03029
]
Glaag_3756
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gag04147
]
Glaag_3756
Enzymes [BR:
gag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Glaag_3756
Messenger RNA biogenesis [BR:
gag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Glaag_3756
Chaperones and folding catalysts [BR:
gag03110
]
Heat shock proteins
HSP60 / Chaperonin
Glaag_3756
Mitochondrial biogenesis [BR:
gag03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Glaag_3756
Exosome [BR:
gag04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Glaag_3756
Exosomal proteins of other body fluids (saliva and urine)
Glaag_3756
Exosomal proteins of breast cancer cells
Glaag_3756
Exosomal proteins of colorectal cancer cells
Glaag_3756
Exosomal proteins of bladder cancer cells
Glaag_3756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEE24685
LinkDB
All DBs
Position
4433018..4434664
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVRFSDDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVIAAVEQLKALSVPCADSKAIAQVGTISANSDTEVGDLIAEAMDKVGKEGVITVEEG
QSLQNELEVVEGMQFDRGYLSPYFMNNQENGTVELDNPFILLVDKKISNIRELLPTLEAV
AKASKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDLATLTGGTV
ISEEIGLELEKVTLEDLGTAKRVVINKDNTTVVDGAGEEDAIQGRVAQIRAQIEESSSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALV
RAASKIVDLQGDNEDQTHGIKLLLRAMESPMRQIAANAGAEASVVTNAVKNGADNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIASLMITTEAMIAEAPKEDAPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtacgtttttctgatgacgctcgcgtaaaaatgctagctggcgtt
aacattctagccaacgcagtaaaagttaccctaggccctaaaggccgtaacgtagtgtta
gacaagtcattcggcgcacctaccatcactaaagatggcgtgtcagtagccaaagaaatc
gaattagaagataaattcgaaaacatgggcgctcaaatggtgaaagaagttgcctctaaa
gccaacgacgaagccggtgacggaactacaactgcaaccgtacttgcacagtctatcgtg
actgaaggcctaaaagccgttgcagcaggtatgaacccaatggatcttaagcgcggtatc
gacaaagcagttatcgctgcggttgaacagcttaaagcgctttctgttccttgtgctgac
agcaaagcgattgcccaagtaggtactatctctgctaactctgacactgaagtaggcgac
cttatcgctgaagcaatggacaaagtaggcaaagaaggcgttatcaccgttgaggaaggc
caatctctacaaaacgaattagaagttgtagaaggtatgcagttcgaccgtggttaccta
tctccttacttcatgaacaaccaagaaaacggaactgtagaactagacaacccgttcatc
cttttggttgacaaaaaaatatctaacatccgtgaattactaccaactcttgaagcagta
gcaaaagcctctaagcctttgctaatcattgctgaagacgttgaaggtgaagcactagca
acacttgttgtgaacaacatgcgcggaatcgttaaagtagcagccgttaaagcgcctggt
ttcggtgaccgtcgtaaagcgatgcttcaagatcttgccacactaactggtggtactgtg
atttctgaagaaatcggcctagaacttgaaaaagtaactctagaagacctaggtacagcg
aagcgcgttgttatcaacaaagacaacaccactgtagttgacggtgctggtgaagaagac
gcgatccaaggccgtgttgctcaaatacgcgctcaaatcgaagaatcaagctcagactac
gacaaagagaaacttcaagagcgcctagctaagctagctggcggtgttgcggttatcaaa
gttggcgcagcaactgaagttgaaatgaaagagaagaaagaccgcgttgaagatgcacta
cacgcaactcgcgcagcggttgaagaaggcgtagtagccggtggcggtgttgcactagtt
cgtgcagcttctaagattgttgaccttcaaggcgacaacgaagaccaaacacacggcatt
aaattgctacttcgcgcaatggaatctccaatgcgtcaaatcgctgctaacgccggtgca
gaagcatcagtagtcactaacgctgttaaaaacggcgctgataactacggctacaacgca
ggtaacgacacttacggcgacatgctagagatgggtattcttgacccaactaaagtgact
cgttcagcactacagttcgctgcatcaatcgcaagcttgatgatcacaactgaagcgatg
atcgctgaagcacctaaagaagatgcgcctgcaatgcctgatatgggcggcatgggtggt
atgggtggaatgggcggcatgatgtaa
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