Glaciecola sp. 4H-3-7+YE-5: Glaag_3808
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Entry
Glaag_3808 CDS
T01483
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gag03021
]
Glaag_3808
Transcription machinery [BR:
gag03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Glaag_3808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
GIT_CC
Motif
Other DBs
NCBI-ProteinID:
AEE24735
LinkDB
All DBs
Position
4502269..4505100
Genome browser
AA seq
943 aa
AA seq
DB search
MAQKHSFALGQRWLSDTQTELGLGTVVSVDNRAVSLLFPATGDSRVYAKQSAPLTRITFG
EGDNITSHEGWEMKITSVSEHNDMLTYTGVRHDTEEDVVLKETFIDHHFQLNQPEQRLFA
GQFDHPKWFDLREQCLNHQYSHSTSSLLGFVGARVDLIPHQLHIAAEVGRRFAPRVLLAD
EVGLGKTIEAALIIHQQLLTARAERVLIVVPSSLVHQWLVEMLRRVNLAFSIFDEERCSA
MSGESGNPFESEQLVICSLDFLTHNSRYYELAMQAPWDLMVVDEAHHLIWSEGQPSQEYQ
VVQGLAQVTKGVLLLTATPDQLGHESHFARLRLLDPARFHDYQSFVKEEQQYSTLAQAIS
PLMSGETLSPENITAIESFAKDEDLGDINGMSTRQKTQLLHNLLDRHGTGRLLFRNSRAG
VSGFPDRKLFSYSLEQPEEYIAAQDEDPTNLTLHLTPERNPDMVNSWFNIDPRVDWFIEK
LQELKGEKVLTICANAATALQLAEVLRVKAGTRATVFHEGMGIVERDKAANYFAQTEDGA
QVLICSEIGSEGRNFQFAHHLVLFDLPQVPDLLEQRIGRLDRIGQTHDVCIHVPYFDMSA
QQVLLDWYHQGLNAFEQTCPTGMTVYEETQELLHSCLMFPTDFAASENLINQTASLHRQL
KERLEQGRDKLLELNSSGKGKVEKLQKEILGAEDSPTLELFMTRLFDTLGLAQEDKDESC
YILRPTETMVATLPGLDEEGMTITYERTTATRLEHVNFFSWDHPMVQHAMETVTTEITGK
SSVALGEDKSLPAGAYWLECLFVLSGKAEKSLQLDRFLPPTPIKICVDTTNSVVEKQFTK
LDKVRGKMGNQLIKALTPQLTKALVVAQNQGEQDAEKVRKQCQKQMKSLLGGELKRMQSL
QKVNPSIRDEEIEHLQQQIDDLKQVISEARVNLEAIRLIVNNP
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaaacactcattcgcacttggtcaacgttggctaagcgatacccaaacagaa
cttggcttaggtacagtggtatccgttgataaccgcgcggtcagcctgttgtttccagcg
accggagacagccgagtttatgccaagcaaagcgccccgcttacgcgtattacgtttggc
gagggcgacaatattaccagccacgaaggctgggaaatgaaaatcaccagcgtcagcgaa
cacaatgatatgttgacctataccggcgtacgtcatgacaccgaagaagatgtcgtctta
aaagaaacctttattgaccatcactttcagctcaatcaacctgaacagcgcttatttgcc
ggtcagtttgaccacccaaaatggtttgatttacgcgagcagtgcttgaatcaccaatac
agccatagcacctcatcgctactaggcttcgtgggcgcccgcgttgacctcattcctcat
cagttacacattgcagccgaagttggccgccgcttcgcaccgcgggttttgttggctgat
gaagtgggattaggtaaaaccattgaggctgcgttgattattcaccaacagttactgaca
gcccgtgctgagcgggtattgattgttgtaccatctagcttggtgcatcaatggctggta
gaaatgttgcgccgtgttaacttggcattttctatttttgatgaagagcgctgcagcgct
atgtcaggtgaaagcggtaatccgtttgaatctgaacaactggttatttgcagtctcgac
tttctaacccacaacagccgttattatgagctggctatgcaagccccttgggatttaatg
gtggtcgatgaagcccatcaccttatatggagcgaagggcagccctctcaagaataccaa
gtcgttcaagggttagctcaagtgacaaaaggtgtgttgttattgactgcaacccctgat
cagctaggtcacgaaagccactttgcccgcctccgcttgcttgaccctgcgcgtttccat
gattaccaaagctttgtcaaagaagagcaacaatacagcacattggcgcaagcgatttct
cctttgatgtcgggcgaaacgcttagccctgaaaacatcaccgcgattgaatcttttgct
aaagacgaagatttgggtgacatcaatggcatgtctacacgacagaaaacccagctgctg
cataatctattggatcgccacggtactggccgtttgttgttccgcaacagccgagctggg
gtcagtggtttcccagatcgtaaattattcagctatagcctagaacagccagaagaatat
attgccgctcaagatgaagacccaaccaacttaaccttgcatttaacccctgagcgtaat
cctgacatggtcaatagctggtttaacattgacccaagagtggattggttcatcgaaaaa
ctgcaggaactcaaaggggaaaaagtcctcactatttgtgccaatgcagctacagcattg
cagctagctgaagtattacgcgtcaaggcgggcacccgcgcaactgtgtttcatgagggc
atgggcatagtagaacgagataaagcagcaaattactttgctcaaacagaagatggcgcc
caagtcctcatttgtagcgaaataggcagcgaagggcgcaacttccagtttgcccaccac
ttggtgttattcgatttacctcaagtacctgatttgcttgagcagcgtatcggtcgtctt
gatcgtattggtcaaactcacgacgtatgtatccatgtgccgtattttgatatgagtgct
caacaagttctgcttgattggtaccatcaagggctaaatgcctttgagcaaacctgccca
acgggaatgacggtatacgaagaaacccaagagctgttacatagttgtttaatgttccct
acagactttgcggccagcgaaaacctgatcaaccaaaccgctagcctacacaggcagctc
aaagagcgtttagagcaagggcgcgacaagcttcttgagcttaattcctcgggtaagggc
aaagtggaaaaactgcaaaaagaaatccttggcgcagaagactctcctactcttgagtta
ttcatgacccgcttgtttgacaccctcggactagctcaagaagacaaagatgaaagttgc
tacattttgcgccccacagagaccatggtagccacgttacctgggcttgatgaagaaggc
atgacgattacgtacgagcgcaccacagcgacccgattagagcatgtgaacttcttcagc
tgggatcaccctatggtgcaacacgccatggagaccgtcaccacggaaatcaccggtaag
agttcagttgcactaggcgaagataaatctctaccagcaggggcttattggctagagtgt
ttattcgtgctgtcaggcaaagcagaaaagtcactacaacttgatcgtttcttgccacca
acaccgattaaaatctgtgttgataccaccaacagcgtagtcgagaagcaatttaccaag
ctagacaaagtgcgcggcaaaatgggtaatcaactgatcaaagccttaacgcctcagttg
accaaagcgttagtggttgcacaaaaccaaggcgagcaagatgctgaaaaggtacgtaag
caatgccaaaagcaaatgaagtcgttgcttggcggtgaattaaagcgcatgcaaagctta
caaaaagtgaacccatcaattcgtgatgaagaaattgagcaccttcaacaacaaattgac
gacttgaagcaggttattagtgaagctagggttaacctagaagccatcagattgatagtg
aataacccctaa
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