Glaciecola sp. 4H-3-7+YE-5: Glaag_3920
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Entry
Glaag_3920 CDS
T01483
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag00250
Alanine, aspartate and glutamate metabolism
gag00410
beta-Alanine metabolism
gag00430
Taurine and hypotaurine metabolism
gag00650
Butanoate metabolism
gag01100
Metabolic pathways
gag01110
Biosynthesis of secondary metabolites
gag01120
Microbial metabolism in diverse environments
gag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Glaag_3920
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Glaag_3920
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Glaag_3920
00430 Taurine and hypotaurine metabolism
Glaag_3920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Glaag_3920
Enzymes [BR:
gag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Glaag_3920
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
AEE24846
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Position
4632213..4633820
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AA seq
535 aa
AA seq
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MAVAEVSLEHLFRVFTMPEGKDSKLAQIEQHLSDNLADFLSQHVVTKVTSLEQIEQSFAE
FNVPEHPEFVSEHAANLLEKLVANSVNTYSPTFIGHMTSALPYFHLSLAKLLVGLNQNLV
KIETSKAFTPLERQVLGMMHELVYAQDSEFYNTYLHSANHALGAFCSGGTIANVTALWVA
RNKALAADGVFKGVAREGLAAGLDHYGYKKMAILSSRRGHYSLSKSVDLLGLGREQLITL
DCPTQRLSPEKALAFGKQYAEQGNKILSIVGVAGTTETGHVDPLDELADVAQELGCHFHV
DAAWGGATLFSSTHRNILKGIQRADSVTIDAHKQMYVPMGAGMVLFKDPNDSNAVRHHAN
YILRAGSKDLGATTLEGSRNGMAMMVYASLHIFGRQGYELLIDQSIDKAKIFARMIQSHP
DFELITPPTLSLLTYRVNPQEVQQQVKADPSLSPHFNEKLDKLTVYVQKQQREAGKSFVS
RTRLQTQTYGEQTMTVFRVVLANPLTTEKDLQNILDEQVAIASKSQNWAELTNTE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtagctgaagtcagtttagagcatttgtttagagtgtttaccatgcctgaaggt
aaagattctaagttagctcagattgagcagcatctgtcagataacttggctgactttttg
tctcaacacgtggtaacgaaagttacgtcacttgagcaaatagaacaaagttttgctgaa
tttaatgtgcccgaacacccagagtttgtgtctgagcacgccgcgaatttacttgaaaaa
ctagtcgctaattcggttaatacttattcgccaacatttatcgggcacatgacatctgcc
ttaccgtattttcatttatcgttagctaaattgttagttggcttgaatcaaaatttggtc
aaaatcgaaacctctaaagcctttacgcctttagagcgtcaagtgttgggtatgatgcac
gaacttgtgtatgcccaagacagtgagttctacaatacgtatttacacagtgcgaatcac
gccttaggcgctttttgctctggtggtaccatagccaatgtgaccgcgctgtgggtagca
cgtaataaagcgttagctgccgatggcgtgtttaaaggggttgcccgagaagggttagcg
gcaggtttagaccattacggctataaaaaaatggcgattttatcttcacgccgagggcat
tattctctatcaaagtcggtggatttactcggtttaggtcgcgaacagctcatcacgtta
gattgccctactcaacgcttgtcccctgaaaaagcactcgcttttggtaagcaatacgct
gaacagggcaataaaatcctcagtattgttggtgtagctggtaccacagaaacaggccac
gtagacccactagacgagctagctgatgtcgcccaagagttgggctgtcatttccatgtg
gatgccgcttggggcggagctacgctattctcaagcacccatagaaatatccttaaaggg
atccagcgcgccgattcggtcaccatagacgcacacaagcaaatgtatgttcctatgggc
gcaggtatggtgttgtttaaagatcctaacgacagtaatgctgtgcgtcatcacgctaac
tacatattgcgtgctggctcaaaagatttaggtgccaccacgttagaaggttcgcgtaac
ggcatggccatgatggtatatgcgtctttacatatatttggtcgccaagggtacgaatta
ttgattgaccaaagcatcgataaagccaaaattttcgcgcgtatgatccagtcacaccct
gactttgaattgatcactccccctaccctgtcattgctcacgtatcgggttaacccacaa
gaagtgcagcaacaggttaaagccgacccatcattaagccctcactttaacgagaagctt
gataagctcactgtttatgtacaaaaacaacagcgtgaagcgggtaaatcatttgtatca
cgtactcgtttgcaaactcaaacctatggcgagcaaaccatgacggtttttcgcgtggta
ttggctaacccgttgaccacagaaaaggacttgcagaacattcttgacgaacaggtagcg
atcgctagcaaaagtcagaattgggctgagctaactaacaccgagtaa
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