Glaciecola sp. 4H-3-7+YE-5: Glaag_3937
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Entry
Glaag_3937 CDS
T01483
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gag03021
]
Glaag_3937
Transcription machinery [BR:
gag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Glaag_3937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
COR
HTH_25
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
AEE24863
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Position
4648785..4649636
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AA seq
283 aa
AA seq
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MTTDMRALTLTVPQTGSIETYVQAVSSIDMLSAEEEKGLAERLQQEDDLLAARKLIMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVRRFDPTVGVRLVSFAVHWIKAEIHEFVL
RNWRIVKVATTKAQRKLFFNLRKNKKRLGWFTHAEVQKVASDLGVSEKEVLQMEARMSSH
DQAFDLSADDDESGSFAPVQFLEDKSPDVETEVVNADWDATASQKLYSAIKTLDERSQHI
IQTRWLSDDKTTLQDLADKYQVSAERVRQIEKNAMKKLQSAMS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgactacagatatgcgtgcattaacgttaaccgttccacagaccggtagcatcgaaact
tatgttcaagctgttagcagcattgacatgttgtccgctgaagaagagaaaggtctagca
gaacgtttacaacaggaagacgatttattagctgcaagaaagctgattatgtctcatcta
cgttttgttgtgcatattgctaaatcttattctggttacggcttacctcaagcggattta
atccaagaaggtaacattggactaatgaaagcagtgagacgtttcgaccctactgtaggc
gttcgattagtgtcttttgctgtacattggataaaagcagaaattcacgaatttgtactt
cgtaactggcgtatagtgaaagttgcgaccaccaaagcgcagcgtaagttattctttaat
ctacgtaaaaacaaaaagcgtttaggttggtttacccatgcagaagtacaaaaggttgca
agcgatcttggggtaagcgagaaagaagtgctacagatggaagctcgtatgagtagccat
gaccaagcgtttgacttgtctgccgatgacgatgaaagtggtagcttcgcgccagtacag
tttttagaagataaaagccctgacgttgaaacagaagtagtaaatgccgattgggatgcg
accgcatcacaaaagctttactctgcgataaaaacacttgatgagcgtagccaacatatt
attcagacgcgttggttaagtgatgataaaaccacattgcaagatcttgcagataagtac
caagtatctgctgagcgtgttcgtcaaatcgaaaagaacgctatgaaaaagttacagagt
gcgatgtcataa
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