Glaciecola sp. 4H-3-7+YE-5: Glaag_3938
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Entry
Glaag_3938 CDS
T01483
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag00061
Fatty acid biosynthesis
gag00071
Fatty acid degradation
gag01100
Metabolic pathways
gag01212
Fatty acid metabolism
gag02024
Quorum sensing
gag04146
Peroxisome
Module
gag_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Glaag_3938
00071 Fatty acid degradation
Glaag_3938
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Glaag_3938
09145 Cellular community - prokaryotes
02024 Quorum sensing
Glaag_3938
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gag01004
]
Glaag_3938
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gag04147
]
Glaag_3938
Enzymes [BR:
gag01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Glaag_3938
Lipid biosynthesis proteins [BR:
gag01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Glaag_3938
Exosome [BR:
gag04147
]
Exosomal proteins
Exosomal proteins of breast milk
Glaag_3938
Exosomal proteins of breast cancer cells
Glaag_3938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEE24864
LinkDB
All DBs
Position
complement(4649742..4651343)
Genome browser
AA seq
533 aa
AA seq
DB search
MNNQALNRNLIERVALGDLLRKRSRDSGEQPAIVDFPAGERRATSYNELNKRVNQLAHGL
IAKGVKQGDKLALFSTNQRDMLTVYFACYKLGVIAVPINFMQGVDDVRYNLEHSETSAVV
YEAMFAELVHASTEGNPHIKLTVQMGNTKGKSDYSLEALLDNQSEQEINDRIIEDRDTAH
MIYTSGTTSRPKAVESSHLALTIAALTGAIELELNRYNRMLLVLPLFHCAALSVLHPVMM
RGGCTVLHAAFDPNIIVDSLEQEKIETAVFMPMMWHALLATPNVEQRDFKHFKLGVYSMA
AMNSRSLEKVRKTFGCVMHLGSGQTEFAPVACMYRDKTPTEFSEGNYWGEPVCTGEQAII
DKQGNELPNGEAGEIVWRGPQVMSGYYKNEQATAEAGKFGWHHTGDIGLIDNQGQLLFID
RIKDTIKSGGENVSSQKVEQALELLEGIERAAAFGVSHPHWGEAVCACIISATLNESDIP
QIEAHCKAQLGQFEVPKAIFICETLPVTGTGKIRKVELRAQYKDLFIPIPVNN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccaagcattgaatagaaacctgatagagcgcgttgccttgggtgacctgcta
cgtaagcgcagcagagacagcggcgagcagcctgccattgtagattttccagccggtgag
cgccgtgcaaccagctataacgaattaaacaaacgggtgaatcagttggcccacggctta
atcgcaaagggcgttaaacaaggggacaaactggcgttattctcaaccaatcagcgcgac
atgcttaccgtgtattttgcctgctacaaactcggtgtcattgccgtaccgattaatttt
atgcaaggcgtagacgatgtgcgctacaaccttgaacacagcgaaacctcagccgttgtt
tacgaagcgatgtttgccgagctagtgcacgccagcaccgaaggtaatccacacatcaag
ctgacggtgcaaatgggcaataccaagggcaaatctgattacagcttagaagcgctgctc
gataatcaaagtgagcaagagattaatgaccgtattattgaggacagagacacggcccac
atgatctacacttcgggcaccacttcacgacctaaagcggttgagtcatcccatctggcg
ctgaccatagcggcgttaaccggtgccattgagcttgagctaaatcgatataatcgcatg
ttgttggtgctgccgctgttccattgtgcggcattatctgtgctgcacccagtgatgatg
cgcgggggctgcactgtgctgcacgccgcatttgaccctaacattattgtggatagtctt
gagcaggaaaaaatcgaaaccgccgtgttcatgcccatgatgtggcatgcactgctcgct
acgccgaatgttgaacagcgcgacttcaaacacttcaaattaggggtgtattccatggct
gctatgaatagtagaagcctagaaaaagtacgtaaaacctttgggtgcgtgatgcatttg
ggcagcggccaaaccgagttcgcccccgttgcctgtatgtatcgagataaaaccccaacc
gaattcagcgaaggtaattattggggggagcccgtttgtactggtgagcaagcgattatt
gataagcaaggcaacgagcttcccaacggcgaagcgggagagatcgtatggcgcgggcca
caagttatgagtggctactataaaaatgagcaagccacagcggaagcgggtaaattcggc
tggcatcacacgggagatataggcttaatcgataaccaaggccaactgctgtttattgac
cggatcaaagacacgataaaatcgggtggtgaaaatgtctcatcacaaaaggtagagcaa
gccttggagttactagagggcatcgagcgcgcggccgccttcggcgtgagccatccccac
tggggcgaagccgtttgcgcctgtattatcagcgcaacattgaacgaatcagacattcct
caaatcgaggcgcactgcaaagcccagctagggcagttcgaagtccctaaagctattttc
atctgcgaaacattacccgtaacaggcacaggaaaaatcagaaaggtagagctaagagcg
caatataaagacttgtttatacccattccagtcaataattaa
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