Glaciecola sp. 4H-3-7+YE-5: Glaag_4107
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Entry
Glaag_4107 CDS
T01483
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Pathway
gag00071
Fatty acid degradation
gag00280
Valine, leucine and isoleucine degradation
gag00310
Lysine degradation
gag00362
Benzoate degradation
gag00380
Tryptophan metabolism
gag00410
beta-Alanine metabolism
gag00640
Propanoate metabolism
gag00650
Butanoate metabolism
gag00907
Pinene, camphor and geraniol degradation
gag00930
Caprolactam degradation
gag01100
Metabolic pathways
gag01110
Biosynthesis of secondary metabolites
gag01120
Microbial metabolism in diverse environments
gag01200
Carbon metabolism
gag01212
Fatty acid metabolism
Module
gag_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Glaag_4107
00650 Butanoate metabolism
Glaag_4107
09103 Lipid metabolism
00071 Fatty acid degradation
Glaag_4107
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Glaag_4107
00310 Lysine degradation
Glaag_4107
00380 Tryptophan metabolism
Glaag_4107
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Glaag_4107
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Glaag_4107
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Glaag_4107
00930 Caprolactam degradation
Glaag_4107
Enzymes [BR:
gag01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Glaag_4107
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Glaag_4107
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Glaag_4107
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Glaag_4107
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AEE25031
LinkDB
All DBs
Position
complement(4860787..4862946)
Genome browser
AA seq
719 aa
AA seq
DB search
MIYEGKSLNVTLLPNGIAELVFDAQGSVNKFDRQTVSELDEATQALKSQSDVKGVLVRSN
KSTFIVGADITEFTGLFDMPAEEVLTWVAKTSQVFDRFEDLPFPTISAINGFALGGGCEM
TLACDLRVADTTAAIGLPEVKLGLMPGFGGTVRLPRLIGADNALEWMTTGRDRKAAKALA
EGAVDAVVAPEKLRDAALSMLQDAIDGKFGWQARRAQKQAPLKLNKNESMMSFSTAKAMV
FAQAGKHYPAPHAMVDTVANAARLDRAGALELENQGFTQLAKSDAAKAQVGIFLADQLVK
SKGKKQAKAATKDVKQTAVLGAGIMGGGIAYQSAVKGTPVIMKDINQGALDLGLNEAAKI
LGKGMQRGKVTPAVMASTLNNIVPTLEYSAIKDVDLVIEAVVENPKVKGIVLKETEQNVS
DDTVICSNTSTISINQLAESLEKPERFCGMHFFNPVHKMPLVEIIRGEKTTDATIATVVA
ATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVMDGADFVAVDKVMEKIFGWPMGPAY
LLDVVGMDTADHASSVMADGIPERMQKIENDPVTLLYKSERLGQKNGKGFYNFSVDKRGR
PAKKAADEAYELFAPHCADKRDFEADEIIARVMIPMANEAIRCLEEGIVGSAAEADMALL
YGLGFPPFRGGVFRYIETMGLANFVALADKYADLGPIYRISDGVREMAASGKSYFSQSA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgaaggcaaaagcctcaacgtaacgctgttgccaaacggcattgcagagctt
gtattcgatgctcaaggttcggtgaataaatttgatcgtcaaacggttagcgaactagat
gaagcaactcaagccctcaaaagtcagtcagacgttaaaggcgtgttggttcgctcgaat
aagtcgacctttatcgtaggggccgatattactgaattcactggcttgttcgatatgcct
gcagaagaagtattaacctgggtagcgaagacgtctcaagtattcgatagattcgaagac
ttacctttcccgaccatttcggctatcaacggtttcgctttaggcggcggttgtgaaatg
accctagcctgtgacttgcgagttgctgacaccacagcagccattggtttaccagaagtt
aaattgggcctaatgcccggttttggtggcactgtacgtttgcctcgcctaatcggtgcc
gataatgccctagagtggatgaccaccggccgtgaccgcaaagccgcgaaagcattagca
gaaggcgcagtggatgctgttgtcgcgcctgaaaaattacgtgatgcagcccttagtatg
ttgcaagacgctattgacggtaagtttggctggcaagcacgtcgcgcgcaaaaacaagcg
ccgcttaagctaaacaaaaatgaatccatgatgagcttctcaacagctaaagccatggtt
tttgctcaagcaggtaagcattacccagcaccacacgctatggttgatacggttgcaaac
gcagcccgtttagaccgcgcgggtgcgcttgaacttgaaaaccaaggttttactcaatta
gccaaaagtgatgcagctaaagctcaagtgggtatcttccttgctgatcagttagtgaaa
agcaaaggtaaaaaacaagccaaggccgcaacgaaagacgtaaaacaaacggctgtttta
ggcgcagggatcatgggtggcggtattgcttatcagtcagctgtgaaaggcacgccagtt
atcatgaaagacatcaaccaaggcgcattggatcttggcttgaatgaagcggcaaaaatt
cttggtaaaggcatgcagcgcggtaaagtgaccccagctgtaatggctagtaccttgaac
aacatcgttccgacccttgaatactcagcgattaaagacgttgatttggtcatcgaagcg
gttgttgaaaacccgaaagtcaaaggcatagtgctgaaagaaacagagcaaaatgtgtct
gatgacacagtgatttgctcaaacacttcgacaatctctattaatcagctcgccgaaagt
ttagaaaaaccagagcgtttctgtggcatgcatttctttaaccctgtgcacaaaatgcct
ttggtggagatcatccgcggcgaaaaaaccactgatgccacgattgcaacagtggtagcg
gcaacgctgaaaatgggtaaaaccccgattgtggttaatgattgcccaggtttcttggta
aaccgtgtgttgttcccttatttcgcgggctttagcaagctagtgatggacggcgctgac
tttgttgcagtagacaaagtgatggagaaaatcttcggttggcctatgggccctgcttac
ctacttgacgtagtaggcatggacacggctgatcacgcatcaagcgtaatggccgatggc
attccagagcgtatgcaaaaaatcgaaaacgaccctgttaccttgttgtataaatctgag
cgtttaggtcagaaaaatggcaaaggtttctacaacttcagtgtcgataaacgtggtcgc
ccggcgaagaaagccgcagatgaagcctacgaattgttcgcaccacattgtgctgacaaa
cgtgacttcgaggcagatgaaatcattgcccgagtgatgatccctatggcgaatgaagcg
attcgttgtttagaagaaggcatagtaggcagtgcagcagaagctgacatggccttgttg
tacggtttaggcttccctccatttagaggcggtgtgttccgttacatcgaaaccatgggc
ttggctaactttgtagcccttgccgacaaatacgcggatttaggtccgatttatcggatt
tctgacggtgtgcgcgaaatggccgcctcaggtaaatcttatttttctcaatcagcctaa
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