Candidatus Gromoviella agglomerans: Gromo_00012
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Entry
Gromo_00012 CDS
T07728
Name
(GenBank) tRNA-specific 2-thiouridylase MnmA N-terminal domain protein
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
gagg
Candidatus Gromoviella agglomerans
Pathway
gagg04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Gromo_00012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gagg03016
]
Gromo_00012
Enzymes [BR:
gagg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Gromo_00012
Transfer RNA biogenesis [BR:
gagg03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Gromo_00012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
QueC
Arginosuc_synth
DUF7411
ATP_bind_3
PAPS_reduct
Motif
Other DBs
NCBI-ProteinID:
UFX98134
LinkDB
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Position
13565..14725
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AA seq
386 aa
AA seq
DB search
MDFDRFDIPYKIGSKIVVAMSGGVDSSVVACILHAMKYEVIGITLKLYDSENTCSIQKRC
CASRDIDDARYVCEKIGIPHYVMNYQSKFNESVIDYFVNSYIKGETPLPCVKCNQSVKFV
DLLNCSKRLNADALATGHYVRKDSKNGKAEMHVGVDKSKDQSYFLFGTTQEQLNFLCFPL
GMVDKSVTREYAKYFNISVANKPDSQDICFVPNGNYSEFISKKRPEVLKKGNIKHIDGSS
LGHHNGTIAYTIGQRRGIGLSSNKPMFVVKIDSDKNEITVGERQHLARNFVTIGDINLLD
SIENILKMRLTVKIRSSHVPVYAKIYAIKLEDRSMMIDKIDFSSCIDIKGLVMKFDLPEY
GVASGQACVLYCETRVLGGGWISNSW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtggattttgatagattcgatattccttacaagattggttcaaaaattgtagttgcaatg
tctggtggtgttgatagttcagttgttgcttgtattcttcatgctatgaaatacgaagtt
attggtataactttaaaattgtatgattcagagaatacttgttctattcaaaaacgttgt
tgcgctagtcgcgatatagatgatgcaaggtatgtttgtgaaaaaataggtattcctcat
tatgttatgaattatcaatctaaatttaacgaatctgtgattgattatttcgtgaattct
tacataaaaggagaaacccctttgccgtgtgtaaaatgcaatcaatctgtcaagtttgta
gatctgttaaattgctcgaaaaggttaaacgcagatgctctagcgactggtcattatgtg
agaaaagattcaaaaaatggtaaagcagaaatgcatgttggagtagataaatcaaaagat
caaagttacttcttatttggaaccactcaagaacagttgaattttttgtgtttccctttg
ggtatggttgataagtctgttacaagagaatatgctaaatatttcaatatttcagttgca
aataaaccggatagtcaagatatatgcttcgttccaaatggtaattactcagaatttata
tcaaagaaacgaccagaagtgttgaagaaaggtaatataaagcatattgatggatctagt
ttaggtcaccacaatggcactattgcttacactatagggcaacgaagaggcattggcctt
agttcgaataaaccaatgtttgtagtgaaaattgattctgataaaaacgaaatcactgtc
ggtgagagacagcatttggcaagaaatttcgtgacaattggtgatattaatttgttagat
tctattgaaaatattttgaaaatgagattgaccgtaaaaattcgatctagtcatgttcct
gtttatgccaagatttatgctataaaattagaagatagatcaatgatgattgataagatt
gatttttctagttgtattgatataaaaggattagttatgaaattcgatttacctgaatat
ggtgtagcttctggccaagcgtgtgttttatattgcgaaactagagtacttggaggtggt
tggatttcaaattcttggtga
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