Candidatus Gromoviella agglomerans: Gromo_00017
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Entry
Gromo_00017 CDS
T07728
Name
(GenBank) RlpA superfamily domain protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
gagg
Candidatus Gromoviella agglomerans
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gagg01011
]
Gromo_00017
Enzymes [BR:
gagg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Gromo_00017
Peptidoglycan biosynthesis and degradation proteins [BR:
gagg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Gromo_00017
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
DUF2615
SMMA_C
Ac76
Motif
Other DBs
NCBI-ProteinID:
UFX98138
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Position
19555..20199
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AA seq
214 aa
AA seq
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MCLFMLRMLVIVMVIFMLDSSARTNSVSNQKYAKVKKSRDNEKNQDNKNDFHYLLYRSIP
KFKYAPYIINQMRFIPQNHFKYAKIGSASYYSNECRGLPTAIGDIFDPMEITAAHRTLPI
PCFVRVTNLQNGRSLIVLVNDRGPYIKGRIIDLSKRCAEILGYVRKGHVMVKVECLPAMS
VALGKIFALVRSNDKYAIALYKKIRKLGVKDLGD
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctatttatgcttagaatgttagtcattgtgatggttatatttatgcttgattca
agtgcaaggactaacagtgtttcaaatcagaaatatgctaaagtgaaaaaatcacgagat
aatgagaaaaatcaagataataaaaatgattttcattatttgctgtatcgtagtatacct
aaatttaaatatgcgccttatattattaatcaaatgcgttttattcctcagaatcacttt
aaatatgcaaaaattggttctgcttcatactattctaatgaatgtagaggtttgccgaca
gcaataggagacatttttgatccaatggaaattacggctgctcacagaactttgcctatt
ccttgttttgttagagttactaatctgcaaaatggtcgtagcctcatagttctagttaat
gatcgtggcccgtacataaaaggtcgaataattgatttatcaaaaagatgtgcggaaata
ttgggatacgtaagaaaagggcatgtgatggtaaaagttgagtgtcttcctgctatgagt
gttgcacttgggaagatatttgctcttgtgcgatcaaatgataagtatgcaattgctctg
tacaaaaaaataagaaaattgggagtaaaagatcttggtgattaa
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