Candidatus Gromoviella agglomerans: Gromo_00229
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Entry
Gromo_00229 CDS
T07728
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gagg
Candidatus Gromoviella agglomerans
Pathway
gagg03030
DNA replication
gagg03430
Mismatch repair
gagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gromo_00229
03430 Mismatch repair
Gromo_00229
03440 Homologous recombination
Gromo_00229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gagg03032
]
Gromo_00229
03400 DNA repair and recombination proteins [BR:
gagg03400
]
Gromo_00229
Enzymes [BR:
gagg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gromo_00229
DNA replication proteins [BR:
gagg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gromo_00229
DNA repair and recombination proteins [BR:
gagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gromo_00229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UFX98338
LinkDB
All DBs
Position
263473..264165
Genome browser
AA seq
230 aa
AA seq
DB search
MSRQVVLDTETTGLSPSNGDRIIEIGCVEVINFVPTSKHYHTYINPMKTVSEKAFEIHGL
SNDFLAKFPKFEEICQDFLDFVGSSDIIAHNAQFDINFINNELKLINKSPLNNKVIDTLD
IARQKFPGSKLNLDALCTRFLINNSSREKHGALIDAQLLSSVYLELNGGRQQEMFANCNS
EQESILSAEEIASYTISEIKITKNEEFEHMQMLEKIQNPLWMRKNKITNE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcaagtagtacttgacactgaaacaacaggccttagtccatcaaatggagat
agaataatagaaataggctgcgtagaagtgataaattttgttccaacgagcaagcactat
catacatatattaacccgatgaaaactgtatctgaaaaagcatttgaaattcatggtttg
tccaacgattttctagcaaaatttccaaaatttgaagagatttgccaagatttccttgat
tttgttggatcaagtgatattattgcacacaacgcgcaatttgatataaattttattaat
aatgagttaaaattaattaataaatctccattaaataataaagtcatcgacacattagat
atagcaagacaaaaatttccaggtagtaagctaaatttagatgcgttatgcacaagattt
ttgatcaacaactcctctcgagaaaaacatggagcactcattgacgcacaattgctgtca
agcgtataccttgaactaaacggaggtagacagcaagaaatgtttgcaaattgcaattca
gaacaagagtcaatattatcagcagaagagattgcttcttatacaatttcagaaataaaa
atcaccaaaaatgaagaatttgagcacatgcaaatgctcgaaaaaattcaaaaccctttg
tggatgagaaaaaataaaataacaaatgagtag
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