Candidatus Gromoviella agglomerans: Gromo_00260
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Entry
Gromo_00260 CDS
T07728
Name
(GenBank) Ribonuclease 3 domain-containing protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gagg
Candidatus Gromoviella agglomerans
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Gromo_00260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gagg03019
]
Gromo_00260
03009 Ribosome biogenesis [BR:
gagg03009
]
Gromo_00260
03036 Chromosome and associated proteins [BR:
gagg03036
]
Gromo_00260
Enzymes [BR:
gagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Gromo_00260
Messenger RNA biogenesis [BR:
gagg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Gromo_00260
Ribosome biogenesis [BR:
gagg03009
]
Eukaryotic type
90S particles
RNase
Gromo_00260
Prokaryotic type
rRNA processing factors
Gromo_00260
Chromosome and associated proteins [BR:
gagg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Gromo_00260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
AAA_35
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
UFX98367
LinkDB
All DBs
Position
complement(298976..299854)
Genome browser
AA seq
292 aa
AA seq
DB search
MHHEGNEKKSMNLQVLEKKIGHVFRNKQLLVDATTHSSVYQSNRLMFERMEFLGDKLLNL
EIALVLFKKYPAFSESALTSRLASIVRREGLFVVAQDLSLAKFAQFRSKNVDKKILADIV
EAIIGCIYLDGGNHIDFIHTFFSKFIENEVINYRSELQELLHKLGFDHPVYENYSSKDGF
GASVRFNIDELKQSLMKLNSLTKKQLTHTICDVDFPKCNESVARDLDEFLSFFCDRSEKN
IGILNNVRSVRFCPISNEIEISASGASIKIANTKVAEISLQILRKILKILLK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcacgaaggaaatgaaaaaaaatcaatgaacttacaagttctcgaaaaaaagata
gggcatgtttttaggaataaacaacttttagttgatgctacaactcattcaagtgtttat
caatcaaaccgactgatgtttgagagaatggaattcttgggtgataaattattgaatttg
gaaattgcgttggttttgtttaaaaaatatccagctttttctgagagtgctcttacatct
cgtctggctagtattgtcaggcgagagggtttatttgttgttgctcaggatttatcttta
gcaaaatttgctcaatttcgatcaaaaaatgttgataaaaagattttggctgacatcgtt
gaggcgataattggttgtatatatcttgatggaggtaatcatattgattttatacataca
tttttcagcaaatttattgaaaatgaggtgataaattaccgttcggaattgcaagaattg
ctccacaagttagggtttgatcatccagtttatgaaaattattcaagtaaagatggcttt
ggtgcgtctgttcgttttaacattgatgagttgaaacaatctctgatgaaacttaattct
ttgacaaagaagcaattgactcatacaatctgtgatgtggattttccaaaatgtaatgaa
tctgtggcaagggatttagacgaatttttatcattcttttgtgatagatctgaaaaaaat
attggtattttaaataatgtacgtagtgtgaggttttgtcctatatcaaatgagattgaa
atctctgcgagcggggcttcaattaaaattgcgaatacaaaggtcgcggagatatctctt
cagattttgagaaaaattttgaaaattttattgaaataa
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