Candidatus Gromoviella agglomerans: Gromo_00268
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Entry
Gromo_00268 CDS
T07728
Name
(GenBank) Crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
gagg
Candidatus Gromoviella agglomerans
Pathway
gagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gromo_00268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gagg03400
]
Gromo_00268
Enzymes [BR:
gagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Gromo_00268
DNA repair and recombination proteins [BR:
gagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gromo_00268
RecFOR pathway proteins
Gromo_00268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
UFX98374
LinkDB
All DBs
Position
310324..311358
Genome browser
AA seq
344 aa
AA seq
DB search
MKGYLKFNMRIIGIDPGITKTGWGVIQLPSQDFSDSRFILMNFILIKNILLNRNCIDSEV
KKSILFNKKIKNSKEKEKNAEIIILTQKLIELFRENDIYEMCIQSFISKIIDLDEHLIKY
CSILDQIDSIICKKFQQNMLIDNNNNAKDSHKINNLIDICQKYSSQMDRNEQSTEENSNN
KYNDNELKNSSANDNNKAINNKRNILVKDFLPQYVSHGIINTKSTTLMHKRLELIYTGIS
KAIQDFNPQSATLEEVFVNQSNPASTLKLGSARGVISLAIAHNNIEIMEILAGDIKYAMC
LKWRGEKQDIKMIVFSILNLQNTRVALDSSDSLASAICSIMKIN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagggctatcttaaattcaatatgagaattatcggaatagatccaggaataacaaag
acaggatggggagtgatacaactcccttctcaggatttttccgactcacgtttcatactt
atgaattttatactaattaaaaatattttactaaatcgcaattgtatagattcagaagta
aaaaaatcaattttgtttaataaaaaaatcaaaaactctaaagaaaaagaaaaaaatgct
gaaatcataattctcactcaaaaattaatagaacttttcagggaaaatgatatatacgaa
atgtgcattcaatcattcatcagcaaaattatcgatcttgacgagcacttaataaaatat
tgctcaattctcgaccaaatagattcaataatttgcaaaaaatttcagcaaaatatgtta
atagataacaataataatgctaaggattcacataagataaacaatttaattgatatttgt
caaaaatatagctcacaaatggataggaatgaacaatccactgaagaaaatagcaataat
aaatacaatgataacgaactcaaaaactcctcagcaaatgacaataataaagcaatcaac
aacaaaagaaatatattagtaaaagattttctacctcaatacgtctctcacggcataata
aatacaaaatcaactacattgatgcacaaacgactcgaattaatatacacaggcatatca
aaagcaattcaagatttcaatccgcaaagtgcaactttagaggaagtattcgttaatcaa
tctaatccagcatcaacattgaaattaggaagcgcaagaggagttatatctctagcaatt
gctcacaacaatatagaaatcatggaaattctagcaggagacataaaatatgcaatgtgc
ttgaaatggcgtggagagaagcaagacataaaaatgatagttttttcaattttgaacctg
caaaatacaagagttgcactggattcatcagatagtctagcaagtgcaatttgctcaatt
atgaagattaactga
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