Candidatus Gromoviella agglomerans: Gromo_00298
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Entry
Gromo_00298 CDS
T07728
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gagg
Candidatus Gromoviella agglomerans
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gagg03032
]
Gromo_00298
03400 DNA repair and recombination proteins [BR:
gagg03400
]
Gromo_00298
Enzymes [BR:
gagg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Gromo_00298
DNA replication proteins [BR:
gagg03032
]
Prokaryotic type
DNA Topoisomerases
Gromo_00298
DNA repair and recombination proteins [BR:
gagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Gromo_00298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UFX98401
LinkDB
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Position
complement(346761..349073)
Genome browser
AA seq
770 aa
AA seq
DB search
MKLLVVESPSKAKIIGKYIGQDYKVISSGGHIRELPSKNGSVDVSDFSMSWILTERGKGF
VKEVKKYLSDVSNIILATDPDREGEGIAWHISEVIKDIKQSKSTVNGRSMQRISFNAVTK
KDVINAIHSPREVDMCLVDAYKTRLRIDYLFGFNISPVLWRKLPGSKSAGRVQSVALRLL
VERAQEIAKFVAQEYWTIDGKFSLPLVNDLLMRLVEFDGKKLDKLDIKNEEMALNIEKSL
KRQSFFISDIQDSNIKKNPNPPFNTATLQQSAVNELNMRAVRVMRIAQDLYEGMEINGEM
QGLITYMRTDSIVMSDEAIVECRKNISDLFGDKYVSESIRVYKSKAKNAQEAHEAIRPTD
FSNTPDKVRAFLSDEHFRVYDIIWRRAVASQMASALLVSRNIKASSKDGATFSVSGSKIL
FDGFYIISRDKNNESFLPDVEIHSKLNVNEFLKDQHFTKPSPNYTEASLVKKLEEIGVGR
PSTYARIFQVLIDREYAFYDGKAMIPHYRGIIVTQFLIHFFAKYIEYDFTAEMENALDEV
SSGNLNANDLMKTFWTDFSKTVMDSSSIQISQVLSVLQNELSFLLFPQGDASKICPKCNS
SLELRLGKINPFIGCSAYANGTCSYVRSLDGEESNSNLKNQHGYDIEIVPGPYGKYLRVS
FDGKMKNISLTGINDEITPDKAIFLYNLPANLGEYNESPLDLCIGRFGPYVKNGSIMASL
KKNDNVFDITFERAVDLIYERANKVVTENFVRKKTAVAKKKYSATRKKKE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattactagtagttgaatcgccgtcaaaagcaaaaattatagggaagtatattggc
caagattacaaggttatttctagtggtgggcatattcgtgagttgccatcaaaaaatggt
tctgttgatgtgagtgatttttctatgagttggattttgactgagcgtggtaaagggttt
gtaaaagaggtgaagaagtatctctctgatgtgtcaaatataattttagcaactgatcct
gatcgagaaggtgaaggaattgcttggcatatatcagaagttataaaagatatcaaacaa
tcaaaatctactgtgaatggtagaagtatgcaaagaatatcttttaatgctgttacgaaa
aaagatgtgattaatgcaatacactcccctagagaagtagatatgtgcttggttgatgca
tacaaaacacgtttgcgaatagattatttgtttggatttaatatttctcctgttttatgg
cgaaaattacctggtagtaaatcagctggtcgtgtgcaatctgttgcattgagattgcta
gttgagagagctcaagaaattgcaaagtttgttgcacaagaatattggactattgatggt
aaattcagtctgcctttagtgaacgatcttttgatgcgtcttgttgagtttgatggaaag
aaactcgataaattggatatcaaaaatgaagaaatggccctgaatattgaaaaatcgctc
aaaagacagagtttttttatcagtgatattcaagattcaaatattaagaaaaatcccaat
cctccatttaatacagcgactctccaacagtctgcagtgaatgagttaaatatgcgtgct
gtgcgcgtaatgagaatagcgcaagacctatatgaaggtatggaaattaatggagaaatg
cagggattaataacttatatgcgtactgacagcattgttatgagtgatgaagcgattgtt
gagtgcagaaaaaatatctctgatttgtttggtgataaatatgtatcagaatccattcgt
gtttataaaagtaaggcaaagaatgcgcaagaagctcatgaagcaattcgtccaaccgat
ttttcaaatactcccgataaagtacgtgcatttttgtctgatgagcattttcgtgtttat
gatattatatggagaagagctgtagcatcacaaatggctagcgctctattagtttcaaga
aatataaaagcaagcagtaaagatggtgctactttttctgtcagtggatcaaagatatta
tttgatggattttatataatctcaagagataagaataatgaatcattccttcctgatgta
gaaattcattctaaacttaatgtaaatgaatttttaaaagaccagcattttactaagcca
tctccaaactatacagaagcgagtttggtaaagaaattagaagaaattggagttggacga
ccaagtacctatgctagaatatttcaagttttgatcgatcgagaatatgcattttatgat
ggcaaggcaatgattcctcactatcgtggcataatagttactcagtttttgatacatttt
tttgcgaagtatattgaatacgatttcactgcagagatggagaatgctctagatgaagtg
tcttctggtaacttaaatgctaatgatttgatgaagactttctggactgatttctctaaa
actgttatggattcatcatcgattcaaatatctcaagtcctatctgttttgcaaaatgaa
ttgagcttcttgctttttcctcaaggggatgcaagtaaaatatgtccgaaatgtaattct
agtctcgaacttcgattaggtaaaatcaatccatttattggatgttcggcttatgcaaat
ggaacttgctcgtatgttcgctctttagatggagaagaatcaaatagtaatttaaaaaat
cagcatggatatgatatagaaattgtacctggaccttacggtaaatatttacgagtgtct
tttgatggaaaaatgaaaaatatatcgctaacaggaattaatgatgaaattactcctgat
aaagcgatttttctgtacaatttgccagcaaaccttggagaatataatgaatctcctctt
gatctatgtataggaaggtttggtccatatgtgaaaaatggtagtattatggcttcgctt
aagaaaaatgacaatgtttttgacattacatttgagagagctgtcgatcttatatatgaa
agggcaaacaaggtagttacagagaattttgtacgaaaaaaaactgctgtggctaagaag
aaatattctgctactcgcaagaaaaaagagtag
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