Candidatus Gromoviella agglomerans: Gromo_00318
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Entry
Gromo_00318 CDS
T07728
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gagg
Candidatus Gromoviella agglomerans
Pathway
gagg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gromo_00318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gagg03400
]
Gromo_00318
Enzymes [BR:
gagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Gromo_00318
DNA repair and recombination proteins [BR:
gagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Gromo_00318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UFX98417
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All DBs
Position
complement(368241..369050)
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AA seq
269 aa
AA seq
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MIIMIKIVSWNVNSIRVRLPILEFLVNEEKPDIILLQETKVQSHQFPYEDILSLGYNSVC
AGEKSYNGVAILSKYSIDDVCYSLHSEQEARYIDCFTAGIRVASVYIPNGRDVCDPHYKY
KEVFFRKLKERLIYLKKFNEILIFGGDYNVAPTDRDVWNPKQWEGVVACTPSEREWLSQV
QSTGMHDILCKNFDDTNVDFNVTLGERRNDFTWWDYRHQAFLKNYGLRIDYFLVCDKAKQ
KFLFGGVSKNVRSLQKTSDHAPIYAVFDV
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgattattatgattaaaatcgtatcttggaacgtcaattcaatcagagtgcgactacca
attctggagttcctcgtaaatgaagagaagccagatattatactactacaagaaacaaag
gtgcagtcgcatcaattcccttacgaagatatattatcgttaggttataactctgtttgt
gcaggagaaaaatcttacaatggagtggcgattttatctaaatattccattgatgatgtc
tgctattcattgcattctgagcaagaagctcgttatattgattgctttaccgcaggaatt
agagttgcatctgtctatattccaaatggacgtgatgtatgtgatcctcactacaagtac
aaagaggttttttttagaaaattgaaagaaagactcatttatttgaaaaaatttaacgaa
attttaatttttggtggtgactataatgttgctccaactgatagagacgtttggaatcca
aagcagtgggagggtgttgttgcttgtactccaagtgaaagagaatggctgagtcaggtc
caatctacaggaatgcacgacattttatgcaaaaattttgatgatacgaatgttgatttt
aatgttacattaggggaacgaaggaatgactttacatggtgggattacagacatcaagca
tttcttaagaactatggcttgagaatagattattttttggtatgtgataaggcaaaacaa
aaattcttatttggtggtgtgtccaaaaatgtgcgatctctgcaaaagacaagtgatcat
gcgccaatatatgcggtttttgatgtatag
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