Candidatus Gromoviella agglomerans: Gromo_00512
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Entry
Gromo_00512 CDS
T07728
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
gagg
Candidatus Gromoviella agglomerans
Pathway
gagg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Gromo_00512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gagg03400
]
Gromo_00512
DNA repair and recombination proteins [BR:
gagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Gromo_00512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
MutS_IV
PHM7_cyt
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UFX98594
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Position
546227..548821
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AA seq
864 aa
AA seq
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MIDKIPGEDCNEEHSHLTPIMRQYLELKEGHKDCLLFFRLGDFYELFFDDAILVSNLLGL
TLTQRDKSRGGVPMCGMPAHASDSYISKLVKLGYKVAICEQMDMPATKPIKGPMRRQVVR
IITQGTATDDILLEPSEYNFILSMSFNKSSNTIGLAFVDVSVGDFFVESVSFNNLLSSLF
RMQPKEVLVENSLFSNLLFADIMKSWRLDWRCFIRSMSDQLFDYNNAYRTLLSFYNVSVL
DGFGVFSSNEIMASGVLFDYIRFTQVDKTPYISAPIKISNKDFVEIDAFTRNSLDIIDTN
SGLKNASLFYVLDSTITKGGSRLLKMNLSSPLRDIDKINERLDCISFFLSHNNICENVRN
VLKNLPDISRILSRICLHRWSLKDISMLKVALIEVNRLRSCFADILNSEKENDNNNNVSA
KESCKSNDSIISSISEVLLEDELADKSSKKVCNLLKNLFFQLGDYDSFCNENMNSIRMDN
IPISLNDGDFILSGFCHELDDIRLLRDDSEKLMLNLQHKYVNESGISNLKIKRNNIIGYY
IEIPQSQEMKALHSFIRRQSTTNTIRYVSEELSVIEDNIENAQCKAKEIETKIVQEMINN
IVKIQDAIHLTASAISQIDVFASLAVIAKKYGYIRPIVDMSEDFIVHDGKHPVVDMIMQN
SSDLFIPNDCILTYNEKMWLLTGPNMAGKSTFLRQNALIAIIAQSGSFVPAKYAKIGCID
KIFSRIGASDDIARGRSTFMVEMIETALILRNATPRSFVILDELGRGTSTQDGLAIAVAC
LEKLLYQIQCRTLFATHYHEIPHMVEVASYNMKIKIANERMLFLYKLAKGNAENSYGIYV
AKLASIPEDVISRAEEILTDLSIG
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgatagataaaattcctggtgaagattgtaatgaagaacattctcatcttactcccatt
atgcgtcagtatttggaattaaaggaaggtcataaggattgtctgctattttttcggtta
ggtgatttttacgaattatttttcgatgatgctattttggtttcgaatttactcggtctg
actttgacgcaaagagacaaatctaggggtggagttccaatgtgcggaatgcctgcgcat
gctagtgattcttatatatcaaaattagtaaaattgggttacaaagttgcaatatgtgag
cagatggatatgcctgctacgaagcctatcaaaggtcctatgcgaagacaagttgtgaga
attattactcaaggaactgcaactgatgatattttgctagagccaagtgaatataatttt
attttgtctatgtcttttaataaatcttcaaatacaattggattggcatttgttgatgtt
tcagttggtgatttttttgttgaatctgtgagttttaataatttgctatcatctttattt
agaatgcaaccaaaggaggtgctggttgaaaattcattatttagcaatttattatttgcg
gatattatgaagagttggcgcttggattggcgctgttttattagatcgatgtcagatcag
ctgtttgattacaataatgcttacaggacattgttgagtttttataatgtttctgtgctt
gatggttttggcgtattcagttcaaatgagattatggcttcaggagttttatttgattat
ataagatttactcaagttgacaaaactccttatatttctgctccaatcaaaatttctaac
aaagattttgttgagatagatgcatttacaagaaacagtttggatataatcgacacaaat
tctggattgaaaaatgctagtttgttttatgttcttgattcaacgataacgaaaggagga
tctaggcttttgaagatgaacttgtcttctcctttacgtgatatagataaaataaatgag
cgacttgattgtatcagtttttttctatctcataataatatttgcgaaaatgttaggaat
gtacttaaaaatctgcctgatatatctaggatattatcaagaatttgcttgcatagatgg
tcattaaaagatatatcaatgttgaaagttgctctgattgaagttaatagattaagatca
tgctttgcagatattctcaattctgaaaaagaaaatgataataataataatgtatcagca
aaagagtcttgcaagagtaatgacagtataatttcatctataagtgaagttttgcttgaa
gatgaactggctgacaaaagtagtaagaaagtatgcaatttgcttaagaatttattcttt
caattaggagattatgacagtttttgcaatgaaaacatgaatagtataagaatggacaat
attcctatttcattgaatgatggagatttcatattaagtggattttgccacgaattggat
gatatacgcttgcttcgtgatgattctgagaaacttatgcttaatttgcaacataagtac
gtgaatgagtctggaatttcaaatcttaagataaaaaggaataatattattggatattac
atagaaattcctcaatctcaggagatgaaagctctgcactcgtttattcgtcgacaatct
accactaatacgattcgctatgttagtgaagagctatcagtgattgaggataatatagaa
aatgcacagtgtaaagctaaggaaatagaaaccaaaattgttcaagaaatgattaataat
atagttaagattcaagatgctatacatcttactgctagtgcaatttctcaaatcgatgtc
tttgcatctttagctgtgattgcgaaaaaatatggatacatccgtcctatagttgatatg
tcagaagattttattgttcatgatggaaagcatccggtagttgatatgattatgcaaaat
agtagcgatttatttattccaaatgattgtattttgacttataacgaaaaaatgtggttg
cttactggtccaaatatggcggggaagagtacttttctcaggcaaaatgcgttaattgct
attattgcacaatctggatcatttgttcctgcaaaatatgcaaaaattggttgtattgat
aagatttttagtcgaattggagcatctgatgacatagcaagaggtcgatcaacttttatg
gttgaaatgatagagactgcactgattttgagaaatgcgactccaaggagttttgtaata
ttggatgagctaggtagaggaacttcaacacaggatggtctggcgattgctgttgcgtgt
ttagaaaaattgctttatcagattcagtgtaggacattatttgcgactcattatcatgag
attccgcacatggtagaagttgcttcgtacaatatgaaaataaaaattgcaaacgaaagg
atgttatttttgtataaattagcgaaagggaatgctgaaaattcttatggaatatatgtt
gcgaaattggctagcattccggaagatgtgatttctcgagctgaagaaatattgactgat
ttatctataggttga
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