Candidatus Gromoviella agglomerans: Gromo_00522
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Entry
Gromo_00522 CDS
T07728
Name
(GenBank) DNA polymerase III subunit gamma/tau N-terminal domain protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gagg
Candidatus Gromoviella agglomerans
Pathway
gagg03030
DNA replication
gagg03430
Mismatch repair
gagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gromo_00522
03430 Mismatch repair
Gromo_00522
03440 Homologous recombination
Gromo_00522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gagg03032
]
Gromo_00522
03400 DNA repair and recombination proteins [BR:
gagg03400
]
Gromo_00522
Enzymes [BR:
gagg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gromo_00522
DNA replication proteins [BR:
gagg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gromo_00522
DNA repair and recombination proteins [BR:
gagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gromo_00522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_5
RCF1-5-like_lid
AAA_22
AAA_2
AAA_14
AAA_30
RuvB_N
AAA_assoc_2
AAA_19
AAA_18
PIF1
ResIII
Rad17
AAA_28
nSTAND3
AAA_24
Sigma54_activ_2
TsaE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UFX98604
LinkDB
All DBs
Position
complement(556103..557218)
Genome browser
AA seq
371 aa
AA seq
DB search
MSSLFLKYRPDCIEKVVGQNIVIEIIKNGIRSKMLPSAFIFSGIRGTGKTTLARILARAF
NCLNVNGQTLPCNQCKACLDKSSVDIIEIDAASNTGVDDVRKIIDSSYYSPTHLTYKVFI
IDEVHMLSKSAFNALLKIIEEPPIHVKFIFATTELNKVPSTIISRCMDFELEIIKPNDML
IHLKEICSLEGKKVSEDALKIICKRSEGSMRDALSMLEQIILSTTSDTIDTSNINQVFLI
DYALVMGIFRCILEGDMQNLLQIFDETKERFSPIQVIHDLLDIMSYAVKAKADDSKIGSY
ETPHEWSKDYDQLLQKYKLDDLLRIWSMLLSGEKDIKTASDATSAFEIILIRILYLESNS
ISFKDNKSVFF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcttgtttttaaaatatcgtcccgattgcatagagaaggttgttggtcaaaat
atagtaattgaaattatcaaaaatggtataagatcaaaaatgttacccagtgcgtttatt
ttttctggcattagaggtactggtaaaaccactctagcacgcattttggcaagagctttc
aactgcttgaatgtaaatggacaaactttaccatgtaatcaatgcaaagcctgtttggat
aagtcaagtgttgatataattgaaatagacgccgcgagcaatacaggagttgatgatgtt
cgcaaaatcatagatagcagctactattctcctactcatttaacatataaggtgttcata
attgatgaagtgcatatgctatctaaaagtgcattcaatgctttgctcaaaataatcgaa
gaacccccaattcacgtaaaattcatctttgcgactacagaattaaacaaagttccatct
acgataatatccagatgcatggactttgaacttgagattataaaaccaaatgacatgcta
attcatcttaaagaaatatgcagtttggaaggaaaaaaagtaagtgaagatgctctgaaa
ataatatgcaaacgatcggaaggatcaatgagagatgcactatctatgctagaacaaata
attttgtcaacaacatcagatacaatcgatacttcaaacataaatcaagtgtttttgatc
gattatgcgcttgtaatgggaatttttcgctgtatattggaaggtgatatgcaaaatctt
cttcaaatatttgatgaaacaaaagaaaggtttagtccaattcaagtaattcatgatctg
cttgatataatgtcttacgctgtaaaggcaaaagctgatgatagcaaaattggatcatat
gaaacaccacatgaatggagcaaagattacgaccaacttttacaaaaatataaacttgac
gatttattaagaatctggagcatgcttctaagcggtgaaaaagacataaaaacagcttct
gatgcgacttctgcgtttgagataattctaataagaatactatacttagaatcaaattct
ataagtttcaaagataataagagtgtttttttttaa
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