KEGG   Geoglobus ahangari: GAH_00141
Entry
GAH_00141         CDS       T03939                                 
Name
(GenBank) DNA ligase I, ATP-dependent {dnl1}
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
gah  Geoglobus ahangari
Pathway
gah03030  DNA replication
gah03410  Base excision repair
gah03420  Nucleotide excision repair
gah03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GAH_00141
   03410 Base excision repair
    GAH_00141
   03420 Nucleotide excision repair
    GAH_00141
   03430 Mismatch repair
    GAH_00141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gah03032]
    GAH_00141
   03400 DNA repair and recombination proteins [BR:gah03400]
    GAH_00141
Enzymes [BR:gah01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GAH_00141
    6.5.1.6  DNA ligase (ATP or NAD+)
     GAH_00141
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     GAH_00141
DNA replication proteins [BR:gah03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    GAH_00141
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     GAH_00141
DNA repair and recombination proteins [BR:gah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     GAH_00141
   NER (nucleotide excision repair)
    Other NER factors
     GAH_00141
   MMR (mismatch excision repair)
    Other MMR factors
     GAH_00141
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: AKG92500
UniProt: A0A0F7IJT0
LinkDB
Position
118840..120510
AA seq 556 aa
MLTFSEFVELCSVVEKISSTLEKTARISAFIKKIEDDDDLYNTILFLMGRVYPEWSERDL
GVGIGLVYEALRISTGVDRRTIENLVREKGDMGLAAEEVVKRKTQTSLFSEELTIRKLRE
VFDEMSSLTGEGSQKKKIILLSELYISCTPIEARYLTRLILKEMRLGVGEGIIRDAIARA
FGIESEIVERAYMVTNDYGRVAVEAKRGGRDALLSLKITPHVPVKMMLAQVAESLEEAVR
EIPHLAVEWKFDGSRVQVHYADGKVTIYSRRLENVTNALPEIVEEIKRNVREGVILDGEV
IAVRDGRPMPFQHVLRRFRRKHDVSKMVEKIPLKVYLYDIMYDGEEIIDLPLRERRERLV
SAVKESDTLRVANQTVTRDPDEIRRIFDEAIKAGHEGVMLKNLDSRYIPGKRGKNWLKFK
ATMETLDLVVVGGEWGEGKRSNLISSFELACLDEYGNLLRVGKVATGFTDEDLEELTELF
KPEIEYQEGKKIVFRPKYVFEVAYQEIQKSPKYESGYALRFPRFVRLRDDKSVEEADTIE
RVARLYEMQFGKGSSN
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgctcacgttctcagagtttgtcgagctgtgcagcgttgtggagaagatctcctcaacc
ctcgagaagaccgcgagaatttccgcgttcataaagaagattgaggatgacgatgacctt
tacaacacgattctcttcctgatgggcagggtctaccccgagtggagcgagagggatctc
ggggttgggatagggcttgtttacgaggcccttagaatttcgaccggagttgacaggcgg
acaatcgagaacctcgtgagggagaagggtgacatggggcttgccgccgaggaggtagtg
aagagaaagacccagacgtccctcttctcggaggaactcaccataaggaagctcagagag
gtcttcgacgaaatgagcagccttaccggagagggaagccagaagaagaagatcatcctc
ctctccgaactctacatctcctgcacacccatcgaagcgaggtacctgacaaggctcatt
ctgaaggagatgaggctgggcgtcggtgagggaataattagagatgcgatcgcaagggca
ttcggaatagagagcgaaatcgtggagagggcgtacatggtcaccaacgactatggcagg
gttgcggtggaggcgaagaggggtggaagggatgcattgctctccctcaagatcacgcca
cacgtcccggtgaagatgatgctcgctcaggtcgcggagagtctggaggaggctgtgagg
gagatacctcacctcgcggtggagtggaagtttgacgggagcagggttcaggttcactat
gccgacgggaaggtcacaatatactcgagaaggctcgagaacgtcacaaacgctctgccg
gagatcgtggaggagatcaagaggaacgtcagggagggcgtgattctggacggagaggtc
atagccgtgagggacggcagacccatgccgttccagcacgtgctcaggaggttcaggagg
aagcacgacgtgtcgaagatggtcgagaaaattccgctcaaggtctacttatacgacata
atgtacgacggagaggagatcatagacctgccgctgagggagagaagggagaggcttgtg
tctgcggtgaaggaaagcgacacgctgagggtggcgaatcagaccgttacgagagatcca
gatgagataaggaggatattcgacgaggcgataaaggcaggacacgagggagttatgctg
aagaacctcgactccagatacattcccggaaagagggggaagaactggctgaagttcaag
gcgaccatggaaacccttgacctcgtggtcgttggaggagagtggggagagggcaagagg
agtaacctgataagctccttcgagctcgcctgccttgacgagtacggaaacctgctcagg
gttggcaaggtggcgacgggattcacggacgaggatctggaggagctgacggagctgttc
aagccagagatagagtaccaggaggggaagaagatcgtcttccgacccaagtacgttttc
gaggtcgcctatcaggagatacagaagagtcccaagtacgagagcggctacgcgctcaga
ttcccgaggtttgtgaggctgagagacgacaagagcgttgaggaggcggacaccatagag
agggttgcaaggctctacgagatgcagttcgggaagggatcaagcaactga

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