Geoglobus ahangari: GAH_00181
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Entry
GAH_00181 CDS
T03939
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gah
Geoglobus ahangari
Pathway
gah03410
Base excision repair
gah03430
Mismatch repair
gah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GAH_00181
03430 Mismatch repair
GAH_00181
03440 Homologous recombination
GAH_00181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gah03400
]
GAH_00181
DNA repair and recombination proteins [BR:
gah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GAH_00181
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GAH_00181
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GAH_00181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
SelA
Motif
Other DBs
NCBI-ProteinID:
AKG92462
UniProt:
A0A0F7II54
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All DBs
Position
148604..149971
Genome browser
AA seq
455 aa
AA seq
DB search
MKEILKRASELSDVVRKAEEVTVVTHIDADGITSGAIAYRCLERAGKEVRIRFVKSLDDE
EIERIANESTFVWFTDLGSGQISSIEKSGLNFIVTDHHVPEKVTENQLNPHIFGYDGSYE
LSGATTTYLLARALGLNYDLSAIAIVGAVGDLQDSNYGRLIGLNSSIVDEAVRNGYVKVV
RDLKFFGKQTRPVYKMLEYTFDPYMPGISGSERGAIRFLDSIGVRVKDGERWLRWIDLSE
EEKRKAVSEIVRLLMSSNTPFSQIMRMVGDTYILLEEEEGSELRDAMEFSTLLNATARYG
EEEVGLLVCLGDRGKAFSRARSLLQNHRRNLSDGLRLVDEIGIEEMQNIQYFHAGRKILD
TIVGIVAGMSYSFANRNKPIIAFAENEDGVKVSARATKLLVERGVHLAQAIKIAAEKVGG
KGGGHSIAAGATIPKGSEEEFLRILDRVIGEQFCK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaaattctaaagcgggcttctgagctctcagatgttgtaagaaaggcagaagag
gttacggttgtcacccacattgatgcagacggcataacctccggggcgatagcctacagg
tgcttagaaagggcgggaaaggaggtaaggataaggttcgtgaagtcgctcgatgatgag
gagattgagagaatagccaacgagagcacgttcgtctggttcacggatcttggctcaggg
cagatcagctccatagagaaatccggactcaattttatcgtaacagatcatcacgttcct
gagaaggtcacggagaatcagctgaacccccacattttcggatacgatggcagctacgag
ctgagcggagcgacaaccacatacctcctcgcaagggctcttggcctgaactacgacctc
tcagccatagccatagtcggagcggttggagatctgcaggacagcaactacggaagactc
atcgggctgaacagcagcattgtggacgaggccgtgaggaacgggtacgttaaagttgtc
agggacctgaagttcttcgggaagcagacgaggcccgtttacaagatgctggagtacacg
ttcgacccctacatgcccgggataagcggaagtgagagaggagcgatcaggttccttgac
tccataggtgtgagggtgaaggacggggagaggtggctcaggtggatagacctcagcgag
gaggagaagaggaaggctgtgtccgagatagtgaggcttctgatgagcagcaacaccccg
ttcagccagataatgaggatggtcggggacacatacatcctgctggaagaggaggaaggg
agcgagcttagggacgcgatggagttctccacgctgcttaacgcaactgcgaggtatgga
gaggaggaggtcgggcttctcgtttgcctcggtgacagggggaaggcattttcaagggca
aggtcgctgctgcagaaccacaggagaaacctgagcgatgggctgaggctcgttgacgag
attggaatagaagagatgcaaaacatccagtacttccacgcgggcaggaagatactggac
acgatagtgggaatagtcgcgggaatgagctactccttcgcgaacaggaacaagcccatc
atagccttcgcggaaaacgaggacggggtgaaggtgtctgcgagagcaacgaagcttctc
gtggaaaggggcgtgcatctggcacaggcaataaagatcgccgccgagaaggttggtgga
aaagggggtgggcacagcatagctgccggagcgacgataccaaaggggagcgaggaggag
ttcctgaggatactggacagggtgataggtgaacagttttgcaagtga
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