Geoglobus ahangari: GAH_00606
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Entry
GAH_00606 CDS
T03939
Name
(GenBank) archaeal exosome-like complex exonuclease 1
KO
K11600
exosome complex component RRP41
Organism
gah
Geoglobus ahangari
Pathway
gah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GAH_00606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gah03019
]
GAH_00606
Messenger RNA biogenesis [BR:
gah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GAH_00606
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
GAH_00606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AKG92054
UniProt:
A0A0F7IGP7
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All DBs
Position
517570..518343
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AA seq
257 aa
AA seq
DB search
MVSEDVNRVESEMQLIVDGKRLDGRAFDELRPIKIKVGVLKRADGSCYLEMGRNKVVAAV
YGPREVHPRHLQDPVQAVVRYRYNMAPFSVEERKRPGPDRRSVEISKVSREAIEAVVMKE
LFPRSGIDVFVEVLQADAGSRTACLNAASVALVDAGVPMRGMISSVAVAKVDDVLVLDPM
KEEDNYGQADIPFAFFIRNDKIESIALLQMDGRVSTDEFKQALEMAKKGAMEIYKMQKEA
IKAKYVVEQEEEVDESG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgaggatgttaatagagttgagagcgagatgcagctcatagttgatgggaag
agactggacggcagggcctttgacgagctaaggccgataaagataaaggtgggagttctc
aagagggctgacggttcatgctaccttgagatggggaggaacaaggtcgtggctgcagtt
tacgggccgagggaggtgcacccgaggcaccttcaggacccggtgcaggctgtggtgagg
tacaggtacaacatggccccgttcagcgttgaggagaggaagaggccgggcccggacagg
aggagcgtggagatctccaaggtgagcagagaagccatagaggcggtcgtgatgaaggag
cttttcccgaggagcgggatagacgttttcgtggaggttcttcaggctgatgcgggaagc
aggactgcctgtctaaacgctgcaagcgttgcgctggttgatgctggcgtgccgatgagg
ggcatgatctcgagcgttgccgttgcgaaggttgacgatgtgctcgtcctcgaccccatg
aaggaggaggacaactacgggcaggcagacataccgttcgcgttcttcataaggaacgac
aagatcgagtccatcgccctgctgcagatggacggcagagtctcgacggatgagttcaaa
caagctctggaaatggcgaagaagggggcgatggagatttacaaaatgcagaaggaggcc
ataaaggccaagtacgttgttgagcaggaagaggaggtagatgaaagtggatga
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