Geoglobus ahangari: GAH_01098
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Entry
GAH_01098 CDS
T03939
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
gah
Geoglobus ahangari
Brite
KEGG Orthology (KO) [BR:
gah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gah03016
]
GAH_01098
Enzymes [BR:
gah01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
GAH_01098
Transfer RNA biogenesis [BR:
gah03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
GAH_01098
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
tRNA_int_end_N2
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
AKG91585
UniProt:
A0A0F7IFG8
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All DBs
Position
921122..922033
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AA seq
303 aa
AA seq
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MGAMKGQLSGDRVTVDFSQRLITRRFGRREGDRVVLLPEEAAYLVHKGTLEVYDGKKAVD
FNDLFSLCDPVRYFVYADLRDRGVRADFGDMGEYLPVSEDDVFETSDLLRRAGKKLAVVD
SEAEVTYFLLERFDGTGNHSEELREFEARFANGFFVTDYLELHRKYFYGVQKGNRVVLSI
FEALYLMEEGFLSSSVDEEKVLSFGRQNVLNFERRYAVYKDLRERRFMVKTGFKFGSDFR
VYEYVRSVSELRHSKYLVKLREAVSMMELACDVRLSSAVNKTVLYPVFRDGRPEYLAVRR
VKM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgatgaagggtcagctcagtggagacagggtaacagtggacttctcacagagg
ctgatcacaaggaggttcggaaggagagaaggggacagggtcgtcctcctcccggaagag
gcagcatacctcgtccacaagggcacgctcgaggtttatgacggcaagaaggccgttgac
ttcaacgacctcttctccctctgcgacccggtgaggtacttcgtctatgctgacttgaga
gacaggggtgtcagggcagacttcggggatatgggcgagtacctgcctgtaagcgaggac
gatgttttcgagacctcagacctccttcggcgcgcgggaaaaaagctggccgttgtcgac
agcgaggcagaggtaacgtacttcctgcttgaaagatttgacggcacggggaaccacagc
gaagagctcagggagtttgaggcgaggtttgcaaacgggttctttgtgacagactacctc
gagctgcacagaaagtacttttacggggttcagaaggggaatcgagtagttctgtcgatc
ttcgaggcgctttacctgatggaagagggctttctctcctccagcgtggatgaggagaaa
gtcctgagcttcggaaggcagaacgtactaaacttcgagaggaggtacgcggtatacaaa
gatctaagggagaggaggttcatggtgaagacaggcttcaaatttggcagcgatttcagg
gtctacgagtacgtgaggagcgtttccgagctcaggcactcaaagtacttggtaaagctg
agagaggccgtttcgatgatggagctggcatgcgatgtcaggctgagcagtgcggtcaac
aaaacagtcctctaccccgtcttccgggatggcaggccagagtaccttgcggttagaagg
gttaagatgtga
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